BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037093
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   176   2e-42
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_002512558.1| pentatricopeptide repeat-containing protein,...   170   1e-40
ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37

>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/127 (64%), Positives = 106/127 (83%)
 Frame = +3

Query: 6   IVEMDQTNVKPTATTFWVLIRRLIASGFTRQAIRAFDDMECFVEKKSGVVDFVFLLDTLC 185
           I+EMDQ +++PT+TTF +LIRR +++G TRQA+RAFDDM CFVEK +   DF +LLDTL 
Sbjct: 140 IIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLLDTLS 199

Query: 186 KYGYVKVATEIFNKRKFGFECNEKVYTVLIYGWWKLNNGKMADRFLNEMIDRGIEPNVVT 365
           KYGYVK+A++IFN+RKF FE N K+YT+LIYGW K+N   +A+R L EM++RGIE NVVT
Sbjct: 200 KYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGIEANVVT 259

Query: 366 YNVVLNG 386
           YNV+LNG
Sbjct: 260 YNVLLNG 266


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  176 bits (446), Expect = 2e-42
 Identities = 80/127 (62%), Positives = 105/127 (82%)
 Frame = +3

Query: 6   IVEMDQTNVKPTATTFWVLIRRLIASGFTRQAIRAFDDMECFVEKKSGVVDFVFLLDTLC 185
           I+EMDQ +++PT+TTF +LIRR +++G TRQA+RAFDDM CFVEK +   DF +LLDTL 
Sbjct: 140 IIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLLDTLS 199

Query: 186 KYGYVKVATEIFNKRKFGFECNEKVYTVLIYGWWKLNNGKMADRFLNEMIDRGIEPNVVT 365
           KYGYVK+A++IFN+RKF FE N K+YT+LIYGW K+N   +A+R L EM++RG+  NVVT
Sbjct: 200 KYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGJXANVVT 259

Query: 366 YNVVLNG 386
           YNV+LNG
Sbjct: 260 YNVLLNG 266


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  175 bits (444), Expect = 3e-42
 Identities = 89/128 (69%), Positives = 99/128 (77%)
 Frame = +3

Query: 3   LIVEMDQTNVKPTATTFWVLIRRLIASGFTRQAIRAFDDMECFVEKKSGVVDFVFLLDTL 182
           LIVEMDQ NVKPT+ TF+VLIRRL+A+G TRQAIRAFDDME FV +      F FLLDTL
Sbjct: 162 LIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDDMESFVSEPVNETHFCFLLDTL 221

Query: 183 CKYGYVKVATEIFNKRKFGFECNEKVYTVLIYGWWKLNNGKMADRFLNEMIDRGIEPNVV 362
           CKYGYVKV  EIFNKRK  F  N K+YTVLIYGW K+    MA+RFL E  +RGIE  VV
Sbjct: 222 CKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGRIDMAERFLKETGERGIEATVV 281

Query: 363 TYNVVLNG 386
           TYNV+LNG
Sbjct: 282 TYNVLLNG 289


>ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548519|gb|EEF50010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 511

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/128 (63%), Positives = 101/128 (78%)
 Frame = +3

Query: 3   LIVEMDQTNVKPTATTFWVLIRRLIASGFTRQAIRAFDDMECFVEKKSGVVDFVFLLDTL 182
           LI++MDQ N++P + TF +LIRRLI++GFTRQAIRAFDDME F+ +      F FLLDTL
Sbjct: 125 LIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAFDDMESFIAETVNQTHFCFLLDTL 184

Query: 183 CKYGYVKVATEIFNKRKFGFECNEKVYTVLIYGWWKLNNGKMADRFLNEMIDRGIEPNVV 362
           CKYGY+KVA E+FNKRKF F  N ++YTVLIYGW K+    MA+RF+ EM + GIE NVV
Sbjct: 185 CKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVV 244

Query: 363 TYNVVLNG 386
           TYNV+L+G
Sbjct: 245 TYNVLLDG 252


>ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Glycine max]
          Length = 510

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/129 (62%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   LIVEMDQTN-VKPTATTFWVLIRRLIASGFTRQAIRAFDDMECFVEKKSGVVDFVFLLDT 179
           LIVEMDQ + + PT +TF  LIRRLI +G TRQA+RAF D++ F E K+   DF  LLDT
Sbjct: 123 LIVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQAVRAFHDIDAFSETKTTPQDFCVLLDT 182

Query: 180 LCKYGYVKVATEIFNKRKFGFECNEKVYTVLIYGWWKLNNGKMADRFLNEMIDRGIEPNV 359
           LCKYG+V++A E+FNK K  F    K+YTVLIYGW K+   K A  FLNEMID+GIEPNV
Sbjct: 183 LCKYGHVRLAVEVFNKNKHTFPPTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNV 242

Query: 360 VTYNVVLNG 386
           VTYNV+LNG
Sbjct: 243 VTYNVLLNG 251