BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036476
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   190   3e-46
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...   148   2e-33
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   145   1e-32
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   142   9e-32
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...   135   8e-30

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  190 bits (483), Expect = 3e-46
 Identities = 94/244 (38%), Positives = 136/244 (55%), Gaps = 3/244 (1%)
 Frame = -3

Query: 813  FWKKLWSMHLPGKVINFLWRSCRSCLPTAINLAM*KVNLDVKCSWCRVCNEDAVHVLFLC 634
            FW K W + +P KV N +W+ C +C+ TA+NL M  V+LD  C WC    E   HVLF C
Sbjct: 427  FWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGC 486

Query: 633  SFASSVWEAVGLKSFLQVLSNDTVFDMLKRAFDMCTKEQAALIGLLCWSIWNRRNKWVWD 454
            S A   W+ +G +      +   +   ++  F    ++  A + L+C S+WN+RN WVW+
Sbjct: 487  SMARECWDLLGFR--FSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWN 544

Query: 453  KTNVSVFGVKSGAMNLLSDWKKAQQENHNCKPAM---SSATRQWTRPPQGWMKINVDAAL 283
            K + + +GV S A  LL    +AQ  +    P +   +  TR+WT+P  GW+KIN D AL
Sbjct: 545  KQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVTRKWTKPELGWLKINTDTAL 604

Query: 282  FPDLNCSGIGSIIRDENGNFVCARSRRIEAAYHPREVEALSLKEALAWVKGLGFRNCIFE 103
            F      G+G ++RD NG  + ARS R    +  RE EALS+KEAL+++K      C FE
Sbjct: 605  FLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALSMKEALSYMKDYQMDKCFFE 664

Query: 102  TDAK 91
             DA+
Sbjct: 665  LDAQ 668


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score =  148 bits (373), Expect = 2e-33
 Identities = 90/270 (33%), Positives = 132/270 (48%), Gaps = 8/270 (2%)
 Frame = -3

Query: 810  WKKLWSMHLPGKVINFLWRSCRSCLPTAINLAM*KVNLDVKCSWCRVCNEDAVHVLFLCS 631
            W  +W + LP KV NFLWR+CR+CLPT I L    V    +C+ C    ED+ H+ F+CS
Sbjct: 366  WNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCS 425

Query: 630  FASSVWEAVGLKSFLQVLSN------DTVFDMLKRAFDMCTKEQAALIGLLCWSIWNRRN 469
             +   W+ +GL S L  + +        VF +L+       ++Q  +  +  WSIW  RN
Sbjct: 426  KSMLYWQRIGLWSPLMAVFDINVSFPTNVFAILQH----LDQQQKQIFSVTLWSIWKHRN 481

Query: 468  KWVWDKTNVSVFGVKSGAMNLLSDWKKAQQENHNCKPAMSSAT-RQWTRPPQGWMKINVD 292
              VW+    +   + + A +LL+ W+ AQ   H      S+    +W +P  G    NVD
Sbjct: 482  NKVWNNITDTAQDICARAGSLLTSWRNAQNIRHPSPQNPSTPNDLKWVKPSPGRFTCNVD 541

Query: 291  AALFPDLNCSGIGSIIRDENGNFVCARSRRIEAAYHPREVEALSLKEALAWVKGLGFRNC 112
            A+     N  GIG  IRDE G FV A++  +         EAL L  A+ WV+ L     
Sbjct: 542  ASFSQARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSAMHWVRDLQLGIV 601

Query: 111  IFETDAKVLADACRGG-KGRSFFHTIVMDC 25
             FE D+K + D+  G   G S F  ++ +C
Sbjct: 602  DFELDSKSVVDSLYGSTSGVSNFSAVINEC 631


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  145 bits (365), Expect = 1e-32
 Identities = 88/278 (31%), Positives = 132/278 (47%), Gaps = 7/278 (2%)
 Frame = -3

Query: 816  GFWKKLWSMHLPGKVINFLWRSCRSCLPTAINLAM*KVNLDVKCSWCRVCNEDAVHVLFL 637
            G W  LW++ +P KV  FLWRSCR+ LPT + L    VN    C+ C   +ED++H+ F 
Sbjct: 1415 GNWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFY 1474

Query: 636  CSFASSVWEAVGL------KSFLQVLSNDTVFDMLKRAFDMCTKEQAALIGLLCWSIWNR 475
            C+ +   W+ +GL      K+ L +    T+F++L+         Q  +   + WSIW +
Sbjct: 1475 CTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQE----LDSSQRVIWACVMWSIWKQ 1530

Query: 474  RNKWVWDKTNVSVFGVKSGAMNLLSDWKKAQQENHNCKPAMSSATRQWTRPPQGWMKINV 295
            RN  +W    ++   V+   +NLL+ W+ AQ                W +P +G  K NV
Sbjct: 1531 RNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQD--------------IWRKPDEGHFKCNV 1576

Query: 294  DAALFPDLNCSGIGSIIRDENGNFVCARSRRIEAAYHPREVEALSLKEALAWVKGLGFRN 115
            DAA F + N  GIG  IRD++G  V AR+          E EA+ L  A+ W K     N
Sbjct: 1577 DAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNN 1636

Query: 114  CIFETDAKVLADACRGGKGR-SFFHTIVMDCVEYFKHF 4
              FE D+K +  +    +   S    I+ +C   F  F
Sbjct: 1637 ITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSF 1674


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  142 bits (358), Expect = 9e-32
 Identities = 87/269 (32%), Positives = 129/269 (47%), Gaps = 1/269 (0%)
 Frame = -3

Query: 810  WKKLWSMHLPGKVINFLWRSCRSCLPTAINLAM*KVNLDVKCSWCRVCNEDAVHVLFLCS 631
            W +LW +  P K++NF WR+ R+CLPT   L +  V+  + C  CR   E  +H L  C 
Sbjct: 508  WAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECV 567

Query: 630  FASSVWEAVGLKSFLQVLSNDTVFDMLKRAFDMCTKEQAALIGLLCWSIWNRRNKWVWDK 451
             A  VW+  GL + LQ      V D L   F  C     A    +CW +W RRN  VW+ 
Sbjct: 568  AARDVWDESGL-AMLQGNFGSFV-DWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNG 625

Query: 450  TNVSVFGVKSGAMNLLSDWKKAQQENHNCKPAMSSATRQWTRPPQGWMKINVDAALFPDL 271
                   V +G   +L  W  A  E       + S + +W +P  GW+KINVD A+FPD 
Sbjct: 626  RIWHSQQVVNGCFTMLESWFHA-NETLATAVTVPSYSSKWQKPDYGWIKINVDGAVFPDK 684

Query: 270  NCSGIGSIIRDENGNFVCARSRRIEAAYHPREVEALSLKEALAWVKGLGFRNCIFETDAK 91
                IG++ RD  G F+   ++       P+ VEAL ++E L+W+        + ETD  
Sbjct: 685  --GAIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCL 742

Query: 90   VLADACRGGK-GRSFFHTIVMDCVEYFKH 7
             +  A +      + F  I++DC++  +H
Sbjct: 743  RVVQAIQHKSCPNTSFGFIIVDCLDVLQH 771


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 519

 Score =  135 bits (341), Expect = 8e-30
 Identities = 89/290 (30%), Positives = 131/290 (45%), Gaps = 38/290 (13%)
 Frame = -3

Query: 816  GFWKKLWSMHLPGKVINFLWRSCRSCLPTAINLAM*KVNLDVKCSWCRVCNEDAVHVLFL 637
            G+W  +W + +P K+ NF+WR CR  LPT   L    V     C  C   +ED  H+  +
Sbjct: 166  GYWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCV 225

Query: 636  CSFASSVWEAVGLKSFLQ--VLSNDT----VFDMLKRAFDMCTKEQAALIGLLCWSIWNR 475
            C+F   VW+   L S +Q  V+  DT    +FD+L+R     T EQ+ +  +  WS+W R
Sbjct: 226  CTFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRF----TLEQSQIF-VTMWSLWKR 280

Query: 474  RNKWVWDKTNVSVFGVKSGAMNLLSDWKKA--------QQENHNCKPAMSSATR------ 337
            RN  VW+  N S       A  ++ +W+ A         Q  H   P+ ++A +      
Sbjct: 281  RNLKVWENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQ 340

Query: 336  ------------------QWTRPPQGWMKINVDAALFPDLNCSGIGSIIRDENGNFVCAR 211
                               W RP +G  K NVDA      N  GIG  +RD++G +V A+
Sbjct: 341  QSHVASAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVLAK 400

Query: 210  SRRIEAAYHPREVEALSLKEALAWVKGLGFRNCIFETDAKVLADACRGGK 61
            +   +  +  R  EAL L  AL W+  + F N  F  D+K+  DA    K
Sbjct: 401  TISFDVVHPVRVGEALGLYHALEWLSDMQFDNMDFAMDSKITYDAFNSQK 450