BLASTX nr result

ID: Bupleurum21_contig00036448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036448
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...   139   3e-31
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...   126   2e-27
ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795...   124   8e-27
ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809...   123   2e-26
ref|XP_003609252.1| RNA binding protein [Medicago truncatula] gi...   119   2e-25

>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/106 (64%), Positives = 81/106 (76%)
 Frame = +3

Query: 3   SNSPHELRYHSSAYEDNGGSYSDAESSCWLGYKEKLPIPPTKEELTEEIHSLELHAYRCT 182
           SN+P++L +H S         SDAES C LGY+E   + PTKEEL  EIH LELHAYRCT
Sbjct: 307 SNNPYKLLHHFSTGPSENDDCSDAESFCRLGYEEGNCLLPTKEELAAEIHRLELHAYRCT 366

Query: 183 IGAFHAAGPLSWEQETLVTDLRISLHISNDEHLIELKNLISTTTSV 320
           I A HA+GPLSWEQETLVT+LR+SLHISNDEHL+EL+NL+S   S+
Sbjct: 367 IEALHASGPLSWEQETLVTNLRLSLHISNDEHLMELRNLVSADISI 412


>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/106 (54%), Positives = 79/106 (74%)
 Frame = +3

Query: 3   SNSPHELRYHSSAYEDNGGSYSDAESSCWLGYKEKLPIPPTKEELTEEIHSLELHAYRCT 182
           SN+ +++ + +   ED  G++SDAES C  GY+E     PT EEL  E+H LELHAYRCT
Sbjct: 275 SNNYYKMHHRAGFIEDIDGNFSDAESFCHRGYEEGTNCFPTNEELAAEVHRLELHAYRCT 334

Query: 183 IGAFHAAGPLSWEQETLVTDLRISLHISNDEHLIELKNLISTTTSV 320
           + A +A+GP SWEQE +VT+LR+SLHISNDEHL+E++NL+S   S+
Sbjct: 335 MEALYASGPFSWEQEEMVTNLRLSLHISNDEHLMEVRNLVSADNSI 380


>ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795963 [Glycine max]
          Length = 404

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/108 (59%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
 Frame = +3

Query: 3   SNSPHELRYHSSA--YEDNGGSYSDAESSCWLGYKEKLPIPPTKEELTEEIHSLELHAYR 176
           S +  +L++  SA  ++D   S+SDAES C    +E    PPT+EEL  EIH LELHAYR
Sbjct: 294 SRNSCKLQFPVSAGPFDDVDSSFSDAESVCQRSDEEGDCSPPTQEELAAEIHRLELHAYR 353

Query: 177 CTIGAFHAAGPLSWEQETLVTDLRISLHISNDEHLIELKNLISTTTSV 320
           CTI A HA+GPLSWEQE L+T+LR+SLHISNDEHL+EL+NLIS+  S+
Sbjct: 354 CTIEALHASGPLSWEQEALMTNLRLSLHISNDEHLMELRNLISSENSI 401


>ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max]
          Length = 397

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/97 (60%), Positives = 74/97 (76%)
 Frame = +3

Query: 30  HSSAYEDNGGSYSDAESSCWLGYKEKLPIPPTKEELTEEIHSLELHAYRCTIGAFHAAGP 209
           ++  ++D   S+SDAES C    +E    PPT+EEL  EIH LELHAY CTI A HA+GP
Sbjct: 298 YAGPFDDVDSSFSDAESVCQRSDEEGNCSPPTQEELAAEIHRLELHAYHCTIEALHASGP 357

Query: 210 LSWEQETLVTDLRISLHISNDEHLIELKNLISTTTSV 320
           LSWEQE L+T+LR+SLHISNDEHL+EL+NLIS+  S+
Sbjct: 358 LSWEQEALMTNLRLSLHISNDEHLMELRNLISSENSI 394


>ref|XP_003609252.1| RNA binding protein [Medicago truncatula]
           gi|355510307|gb|AES91449.1| RNA binding protein
           [Medicago truncatula]
          Length = 468

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/91 (64%), Positives = 71/91 (78%)
 Frame = +3

Query: 36  SAYEDNGGSYSDAESSCWLGYKEKLPIPPTKEELTEEIHSLELHAYRCTIGAFHAAGPLS 215
           S +ED   SYSDAES+C  GY E     PT++EL  +IH LELHAYRCTI A  A+GPLS
Sbjct: 288 SPFEDVDSSYSDAESTCKRGYMEATCSRPTRKELAMKIHRLELHAYRCTIEALFASGPLS 347

Query: 216 WEQETLVTDLRISLHISNDEHLIELKNLIST 308
           WEQE L+T+LR+SL+ISNDEHL EL+NLIS+
Sbjct: 348 WEQEALMTNLRLSLNISNDEHLTELRNLISS 378


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