BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036398
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   275   8e-72
emb|CBI17585.3| unnamed protein product [Vitis vinifera]              261   9e-68
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   261   9e-68
ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...   236   3e-60
ref|XP_003611888.1| Pentatricopeptide repeat-containing protein ...   220   2e-55

>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  275 bits (702), Expect = 8e-72
 Identities = 138/230 (60%), Positives = 179/230 (77%)
 Frame = +1

Query: 1   EALKGIPHFSHTQNSLHALAKILAKSGQTARLKALINGINSGKFINVARVSFMDKMRWYA 180
           E LK IPHF+H Q+++HALA +LA+S ++  LK+L+N IN GK+ NV RVSFM+ M+WYA
Sbjct: 90  EILKNIPHFTHNQSTIHALATVLARSCKSFELKSLLNEINVGKYCNV-RVSFMNLMQWYA 148

Query: 181 AARDLDEVLSVWNEWRAVQNRPCTESYNIIMALCAQTHKDFEAMKTFCRLIDEGGLPNAR 360
           A  DLD VL VW+E+R    R CTESYNIIM+L A+   D +A++ F R+IDEG +PN+R
Sbjct: 149 AVGDLDAVLDVWDEYRHSDKRVCTESYNIIMSLFAKMGNDAKAVEIFYRMIDEGAIPNSR 208

Query: 361 TYTVIIEHLVNLGKLDIAMQIFQMLPSMRMKRTLRQYSVLVGAFSGTGQYNMVKILLDYM 540
           TYTV+IEHLV LGKLD A+++F +LP MR+KRTL+QYSVLV  F G  +++ VK L++ M
Sbjct: 209 TYTVMIEHLVKLGKLDSAIEVFSVLPLMRIKRTLKQYSVLVDGFVGVERFDEVKKLVNEM 268

Query: 541 RIDAILPGRAMHSSLQRMQEAGYVEETAELVKEMLPDERIKNIKSSTPDS 690
           ++D   PGRAMHS+LQRMQEAG+VEET E VKEM PDERIK+I S +  S
Sbjct: 269 KVDGKFPGRAMHSALQRMQEAGFVEETKEFVKEMFPDERIKSIGSCSDGS 318


>emb|CBI17585.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  261 bits (667), Expect = 9e-68
 Identities = 130/223 (58%), Positives = 171/223 (76%)
 Frame = +1

Query: 1   EALKGIPHFSHTQNSLHALAKILAKSGQTARLKALINGINSGKFINVARVSFMDKMRWYA 180
           E LK IPHF HTQ ++ ALAKILAKS ++A LK+L++ IN+GKF NV R+SFM+ M+W+A
Sbjct: 89  EILKTIPHFCHTQATIRALAKILAKSQRSAELKSLVDDINAGKFWNV-RISFMELMKWHA 147

Query: 181 AARDLDEVLSVWNEWRAVQNRPCTESYNIIMALCAQTHKDFEAMKTFCRLIDEGGLPNAR 360
           AA DL+ VL  WN +R    +   E+YNI+M L  Q  KD EAM+ F ++I EG +PN+R
Sbjct: 148 AAGDLESVLHAWNRYRVSGKQVSIEAYNIVMRLYVQMGKDSEAMQIFHKIISEGAIPNSR 207

Query: 361 TYTVIIEHLVNLGKLDIAMQIFQMLPSMRMKRTLRQYSVLVGAFSGTGQYNMVKILLDYM 540
           TYTV++EHL N GKLD A+++F +LP MR++RTLRQYS+LV  F+   ++++VK LLD M
Sbjct: 208 TYTVVLEHLANSGKLDSAIKVFNILPLMRIRRTLRQYSILVEEFTSINRFDVVKALLDEM 267

Query: 541 RIDAILPGRAMHSSLQRMQEAGYVEETAELVKEMLPDERIKNI 669
           +ID ILPGRAM  SLQRMQEAG+V ET E ++ MLPDERIKN+
Sbjct: 268 QIDGILPGRAMQLSLQRMQEAGFVHETDEFLRGMLPDERIKNV 310


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  261 bits (667), Expect = 9e-68
 Identities = 130/223 (58%), Positives = 171/223 (76%)
 Frame = +1

Query: 1   EALKGIPHFSHTQNSLHALAKILAKSGQTARLKALINGINSGKFINVARVSFMDKMRWYA 180
           E LK IPHF HTQ ++ ALAKILAKS ++A LK+L++ IN+GKF NV R+SFM+ M+W+A
Sbjct: 89  EILKTIPHFCHTQATIRALAKILAKSQRSAELKSLVDDINAGKFWNV-RISFMELMKWHA 147

Query: 181 AARDLDEVLSVWNEWRAVQNRPCTESYNIIMALCAQTHKDFEAMKTFCRLIDEGGLPNAR 360
           AA DL+ VL  WN +R    +   E+YNI+M L  Q  KD EAM+ F ++I EG +PN+R
Sbjct: 148 AAGDLESVLHAWNRYRVSGKQVSIEAYNIVMRLYVQMGKDSEAMQIFHKIISEGAIPNSR 207

Query: 361 TYTVIIEHLVNLGKLDIAMQIFQMLPSMRMKRTLRQYSVLVGAFSGTGQYNMVKILLDYM 540
           TYTV++EHL N GKLD A+++F +LP MR++RTLRQYS+LV  F+   ++++VK LLD M
Sbjct: 208 TYTVVLEHLANSGKLDSAIKVFNILPLMRIRRTLRQYSILVEEFTSINRFDVVKALLDEM 267

Query: 541 RIDAILPGRAMHSSLQRMQEAGYVEETAELVKEMLPDERIKNI 669
           +ID ILPGRAM  SLQRMQEAG+V ET E ++ MLPDERIKN+
Sbjct: 268 QIDGILPGRAMQLSLQRMQEAGFVHETDEFLRGMLPDERIKNV 310


>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Glycine max]
          Length = 658

 Score =  236 bits (602), Expect = 3e-60
 Identities = 117/225 (52%), Positives = 168/225 (74%)
 Frame = +1

Query: 4   ALKGIPHFSHTQNSLHALAKILAKSGQTARLKALINGINSGKFINVARVSFMDKMRWYAA 183
           AL+   HFSHT ++LH+LA +LAKSG+++ LK+L++ I + +F +V ++SFM+ M+W+AA
Sbjct: 97  ALEKSSHFSHTHHTLHSLATVLAKSGRSSELKSLVDDIRANRFGSV-QISFMNLMQWHAA 155

Query: 184 ARDLDEVLSVWNEWRAVQNRPCTESYNIIMALCAQTHKDFEAMKTFCRLIDEGGLPNART 363
            RDLD VL VW ++    +  CTESYNI+M L AQ  KDFEA++ F R+IDEG LPN R+
Sbjct: 156 VRDLDTVLQVWEQYALENDHLCTESYNIVMTLYAQMGKDFEAVRVFRRMIDEGSLPNCRS 215

Query: 364 YTVIIEHLVNLGKLDIAMQIFQMLPSMRMKRTLRQYSVLVGAFSGTGQYNMVKILLDYMR 543
           YTVIIEHLV   KL  A+++F +LPSMR+KRTLRQYSVL+  F G+ Q++ V+IL++ M+
Sbjct: 216 YTVIIEHLVKSRKLSEALEVFNLLPSMRIKRTLRQYSVLLEGFVGSKQFDEVRILVEEMQ 275

Query: 544 IDAILPGRAMHSSLQRMQEAGYVEETAELVKEMLPDERIKNIKSS 678
           +D ILP R M   LQ+M+E G +E   +L++ +LPDE I+++  S
Sbjct: 276 VDGILPSRGMGLLLQQMKEEGILEGKEQLLRGILPDETIRSVSYS 320


>ref|XP_003611888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513223|gb|AES94846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 659

 Score =  220 bits (560), Expect = 2e-55
 Identities = 105/223 (47%), Positives = 161/223 (72%)
 Frame = +1

Query: 22  HFSHTQNSLHALAKILAKSGQTARLKALINGINSGKFINVARVSFMDKMRWYAAARDLDE 201
           +FSHTQN+LHALA +LAKSG+   LK+LI+ I S +F NV ++SFM+ M+WYAAA+D+D 
Sbjct: 102 NFSHTQNTLHALATVLAKSGKLVELKSLIDDIESKRFGNV-KISFMNLMQWYAAAKDIDS 160

Query: 202 VLSVWNEWRAVQNRPCTESYNIIMALCAQTHKDFEAMKTFCRLIDEGGLPNARTYTVIIE 381
           V+ VW+++R      CTESYNI+M L  +  KD EA+  FC+++D+G +PN R+Y++IIE
Sbjct: 161 VVRVWDQYRVESRIVCTESYNIVMTLYVEMGKDSEAVGIFCKMVDDGSVPNCRSYSIIIE 220

Query: 382 HLVNLGKLDIAMQIFQMLPSMRMKRTLRQYSVLVGAFSGTGQYNMVKILLDYMRIDAILP 561
           HLV   K   A+++F +LP MR+KRTL+QYSVL+    G+  ++ V +L++ M++D ILP
Sbjct: 221 HLVKCRKFLEAIEVFNLLPLMRIKRTLKQYSVLIEGLVGSKMFDEVGVLVNEMQVDGILP 280

Query: 562 GRAMHSSLQRMQEAGYVEETAELVKEMLPDERIKNIKSSTPDS 690
            R +   LQ++++ G++++  EL + + PDERIK++  S   S
Sbjct: 281 SRTVSLLLQQVKDEGFLKDVDELFEGICPDERIKSVSFSIDSS 323