BLASTX nr result

ID: Bupleurum21_contig00036304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036304
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37234.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002267519.1| PREDICTED: uncharacterized protein LOC100241...   134   6e-30
emb|CAN81514.1| hypothetical protein VITISV_012030 [Vitis vinifera]   133   1e-29
ref|XP_002303096.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002521158.1| conserved hypothetical protein [Ricinus comm...   122   4e-26

>emb|CBI37234.3| unnamed protein product [Vitis vinifera]
          Length = 809

 Score =  134 bits (338), Expect = 6e-30
 Identities = 73/118 (61%), Positives = 90/118 (76%), Gaps = 3/118 (2%)
 Frame = +1

Query: 73  MIGVQNHN--GHDKPFLGCLGHVVNLFDLSAGMTGNRMPTYKSHREGSPLSRSRSDVSGM 246
           M G+ N    G +KPF GCLG +VNLFDL+AGM GNRM T + H++GSPLSRSRSDV+ +
Sbjct: 1   MSGIHNSKTRGFEKPFPGCLGRMVNLFDLNAGMPGNRMLTDRPHQDGSPLSRSRSDVARV 60

Query: 247 SL-VKDQIQDKVTISELQRNSSNRTAHGTPVKMLIAEEMSKEVESKQKQPNVVAKLMG 417
           S    DQ++DK  +SEL R +SNR ++GTPVKMLIA+EMSKEV+ K   P VVAKLMG
Sbjct: 61  SSPTGDQVEDKPMVSELSR-TSNRKSNGTPVKMLIAQEMSKEVDLKHNPPGVVAKLMG 117


>ref|XP_002267519.1| PREDICTED: uncharacterized protein LOC100241277 [Vitis vinifera]
          Length = 991

 Score =  134 bits (338), Expect = 6e-30
 Identities = 73/118 (61%), Positives = 90/118 (76%), Gaps = 3/118 (2%)
 Frame = +1

Query: 73  MIGVQNHN--GHDKPFLGCLGHVVNLFDLSAGMTGNRMPTYKSHREGSPLSRSRSDVSGM 246
           M G+ N    G +KPF GCLG +VNLFDL+AGM GNRM T + H++GSPLSRSRSDV+ +
Sbjct: 1   MSGIHNSKTRGFEKPFPGCLGRMVNLFDLNAGMPGNRMLTDRPHQDGSPLSRSRSDVARV 60

Query: 247 SL-VKDQIQDKVTISELQRNSSNRTAHGTPVKMLIAEEMSKEVESKQKQPNVVAKLMG 417
           S    DQ++DK  +SEL R +SNR ++GTPVKMLIA+EMSKEV+ K   P VVAKLMG
Sbjct: 61  SSPTGDQVEDKPMVSELSR-TSNRKSNGTPVKMLIAQEMSKEVDLKHNPPGVVAKLMG 117


>emb|CAN81514.1| hypothetical protein VITISV_012030 [Vitis vinifera]
          Length = 1081

 Score =  133 bits (335), Expect = 1e-29
 Identities = 72/118 (61%), Positives = 90/118 (76%), Gaps = 3/118 (2%)
 Frame = +1

Query: 73  MIGVQNHN--GHDKPFLGCLGHVVNLFDLSAGMTGNRMPTYKSHREGSPLSRSRSDVSGM 246
           M G+ N    G +KPF GCLG +VNLFDL+AGM GNRM T + H++GSPLSRSRSDV+ +
Sbjct: 1   MSGIHNSKTRGFEKPFPGCLGRMVNLFDLNAGMPGNRMLTDRPHQDGSPLSRSRSDVARV 60

Query: 247 SL-VKDQIQDKVTISELQRNSSNRTAHGTPVKMLIAEEMSKEVESKQKQPNVVAKLMG 417
           S    DQ++DK  +SEL R +SNR ++GTP+KMLIA+EMSKEV+ K   P VVAKLMG
Sbjct: 61  SSPTGDQVEDKPMVSELSR-TSNRKSNGTPMKMLIAQEMSKEVDLKHNPPGVVAKLMG 117


>ref|XP_002303096.1| predicted protein [Populus trichocarpa] gi|222844822|gb|EEE82369.1|
           predicted protein [Populus trichocarpa]
          Length = 935

 Score =  130 bits (326), Expect = 1e-28
 Identities = 69/119 (57%), Positives = 89/119 (74%), Gaps = 4/119 (3%)
 Frame = +1

Query: 73  MIGVQNHNGH--DKPFLGCLGHVVNLFDLSAGMTGNRMPTYKSHREGSPLSRSRSDVSGM 246
           M G+Q   G   +KPF GCLG +VNLFDLS G+ GNR+ T K H +GS +SRS+SDV+ M
Sbjct: 1   MNGMQYRKGQKIEKPFPGCLGRMVNLFDLSNGVAGNRLLTDKPHHDGSSISRSQSDVARM 60

Query: 247 SLVK--DQIQDKVTISELQRNSSNRTAHGTPVKMLIAEEMSKEVESKQKQPNVVAKLMG 417
             V   DQ++DK+ +SEL+R+S N+ A+ TP+K LIA+EMSKEVESK   PN+VAKLMG
Sbjct: 61  LSVPFGDQVEDKMIVSELKRSSLNKKANATPMKTLIAQEMSKEVESKHNPPNLVAKLMG 119


>ref|XP_002521158.1| conserved hypothetical protein [Ricinus communis]
           gi|223539727|gb|EEF41309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 990

 Score =  122 bits (305), Expect = 4e-26
 Identities = 67/119 (56%), Positives = 87/119 (73%), Gaps = 4/119 (3%)
 Frame = +1

Query: 73  MIGVQNHNGH--DKPFLGCLGHVVNLFDLSAGMTGNRMPTYKSHREGSPLSRSRSDVSGM 246
           M G+Q+      +K F GCLG +VNLFDLS G T N++ T K HR+ S LSRSRSDV+ M
Sbjct: 1   MNGIQSTRAQKIEKQFPGCLGRMVNLFDLSNGATENKLLTDKPHRDASSLSRSRSDVARM 60

Query: 247 SLVK--DQIQDKVTISELQRNSSNRTAHGTPVKMLIAEEMSKEVESKQKQPNVVAKLMG 417
                 DQI+DK+ +SEL+R+SS++ ++GTP+K LIA EMSKEV+S+   PNVVAKLMG
Sbjct: 61  MNAPFGDQIEDKMIVSELRRSSSSKKSNGTPMKTLIAREMSKEVDSRCNPPNVVAKLMG 119


Top