BLASTX nr result

ID: Bupleurum21_contig00036209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036209
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604758.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    84   2e-33
ref|XP_003598094.1| Helicase-like protein [Medicago truncatula] ...    84   6e-33
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    87   2e-32
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    87   2e-32
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    87   2e-32

>ref|XP_003604758.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355505813|gb|AES86955.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 175

 Score = 84.0 bits (206), Expect(2) = 2e-33
 Identities = 35/63 (55%), Positives = 50/63 (79%)
 Frame = -2

Query: 333 LRNISPARGLCNGTRLIITQLGKQVIEGIIITGNHIGEKTFIPRICMRPTDSSLPFVFKE 154
           +RN+ P  GLCNGTRLIIT++G+ V+EG +ITG++IGEK FIPR+ + P+D+ +PF F+ 
Sbjct: 38  MRNLDPTTGLCNGTRLIITKMGRYVLEGKVITGSNIGEKVFIPRLSLEPSDTRIPFKFQR 97

Query: 153 YNF 145
             F
Sbjct: 98  RQF 100



 Score = 84.0 bits (206), Expect(2) = 2e-33
 Identities = 39/52 (75%), Positives = 47/52 (90%)
 Frame = -1

Query: 157 RIQFLVALCYAMTINKSQGQTLQSVGLYLPKPVFSHGQLYVAISRVTSPSGL 2
           R QF +++C+AMTINKSQGQ+L+ VG+YLP+PVFSHGQLYVAISRVTS  GL
Sbjct: 97  RRQFPISVCFAMTINKSQGQSLKQVGIYLPQPVFSHGQLYVAISRVTSRKGL 148


>ref|XP_003598094.1| Helicase-like protein [Medicago truncatula]
            gi|355487142|gb|AES68345.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1672

 Score = 84.0 bits (206), Expect(2) = 6e-33
 Identities = 35/63 (55%), Positives = 50/63 (79%)
 Frame = -2

Query: 333  LRNISPARGLCNGTRLIITQLGKQVIEGIIITGNHIGEKTFIPRICMRPTDSSLPFVFKE 154
            +RN+ P  GLCNGTRLIIT++G+ V+EG +ITG++IGEK FIPR+ + P+D+ +PF F+ 
Sbjct: 1535 MRNLDPTAGLCNGTRLIITKMGRYVLEGKVITGSNIGEKVFIPRLSLEPSDTRIPFKFQR 1594

Query: 153  YNF 145
              F
Sbjct: 1595 RQF 1597



 Score = 82.0 bits (201), Expect(2) = 6e-33
 Identities = 38/52 (73%), Positives = 46/52 (88%)
 Frame = -1

Query: 157  RIQFLVALCYAMTINKSQGQTLQSVGLYLPKPVFSHGQLYVAISRVTSPSGL 2
            R QF +++C+AMTINKSQGQ+L+ VG+YLP+PVF HGQLYVAISRVTS  GL
Sbjct: 1594 RRQFPISICFAMTINKSQGQSLKQVGIYLPQPVFYHGQLYVAISRVTSRKGL 1645


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score = 86.7 bits (213), Expect(2) = 2e-32
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = -1

Query: 157  RIQFLVALCYAMTINKSQGQTLQSVGLYLPKPVFSHGQLYVAISRVTSPSGL 2
            R QF + +CYAMTINKSQGQ+L  VGLYLP+PVFSHGQLYVA SRVTSP GL
Sbjct: 1348 RRQFPIKVCYAMTINKSQGQSLNYVGLYLPRPVFSHGQLYVAFSRVTSPEGL 1399



 Score = 77.4 bits (189), Expect(2) = 2e-32
 Identities = 36/63 (57%), Positives = 46/63 (73%)
 Frame = -2

Query: 333  LRNISPARGLCNGTRLIITQLGKQVIEGIIITGNHIGEKTFIPRICMRPTDSSLPFVFKE 154
            LRNI+PA G+CNGTRLIIT LG++VIE  IITG+++G K  IPRI +   DS  PF+ + 
Sbjct: 1289 LRNINPALGMCNGTRLIITHLGERVIEAKIITGSNVGSKVLIPRIVLTSNDSKWPFLLRR 1348

Query: 153  YNF 145
              F
Sbjct: 1349 RQF 1351


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score = 86.7 bits (213), Expect(2) = 2e-32
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = -1

Query: 157  RIQFLVALCYAMTINKSQGQTLQSVGLYLPKPVFSHGQLYVAISRVTSPSGL 2
            R QF + +CYAMTINKSQGQ+L  VGLYLP+PVFSHGQLYVA SRVTSP GL
Sbjct: 1348 RRQFPIKVCYAMTINKSQGQSLNYVGLYLPRPVFSHGQLYVAFSRVTSPEGL 1399



 Score = 77.4 bits (189), Expect(2) = 2e-32
 Identities = 36/63 (57%), Positives = 46/63 (73%)
 Frame = -2

Query: 333  LRNISPARGLCNGTRLIITQLGKQVIEGIIITGNHIGEKTFIPRICMRPTDSSLPFVFKE 154
            LRNI+PA G+CNGTRLIIT LG++VIE  IITG+++G K  IPRI +   DS  PF+ + 
Sbjct: 1289 LRNINPALGMCNGTRLIITHLGERVIEAKIITGSNVGSKVLIPRIVLTSNDSKWPFLLRR 1348

Query: 153  YNF 145
              F
Sbjct: 1349 RQF 1351


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1531

 Score = 86.7 bits (213), Expect(2) = 2e-32
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = -1

Query: 157  RIQFLVALCYAMTINKSQGQTLQSVGLYLPKPVFSHGQLYVAISRVTSPSGL 2
            R QF + +CYAMTINKSQGQ+L  VGLYLP+PVFSHGQLYVA SRVTSP GL
Sbjct: 1321 RRQFPIKVCYAMTINKSQGQSLNYVGLYLPRPVFSHGQLYVAFSRVTSPEGL 1372



 Score = 77.4 bits (189), Expect(2) = 2e-32
 Identities = 36/63 (57%), Positives = 46/63 (73%)
 Frame = -2

Query: 333  LRNISPARGLCNGTRLIITQLGKQVIEGIIITGNHIGEKTFIPRICMRPTDSSLPFVFKE 154
            LRNI+PA G+CNGTRLIIT LG++VIE  IITG+++G K  IPRI +   DS  PF+ + 
Sbjct: 1262 LRNINPALGMCNGTRLIITHLGERVIEAKIITGSNVGSKVLIPRIVLTSNDSKWPFLLRR 1321

Query: 153  YNF 145
              F
Sbjct: 1322 RQF 1324


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