BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036170
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   174   1e-41
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   167   2e-39
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   165   6e-39
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   165   6e-39
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   163   2e-38

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  174 bits (440), Expect = 1e-41
 Identities = 91/196 (46%), Positives = 118/196 (60%), Gaps = 1/196 (0%)
 Frame = +2

Query: 2   SKPGERSGIHWMSWARLTRHKSSGGLGFRDFRDFNLAMLGKQGWRFLTNPDSLVSRVYKA 181
           S P  RS I WMSW ++ + K  GGLGFR   DFNLA+L KQGWRFL NPDSLV+R+++A
Sbjct: 297 SNPQCRS-IRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQA 355

Query: 182 RYFQNGSFLDSSLGKNPSFIWRSIWEAKDLVSAGARWRVGSGESINIVGQPWLLDDNNP- 358
           RYF+N SFL++ LG NPS++WRSI  A+ L+  G  W + SG  + + G  WL D +N  
Sbjct: 356 RYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDSSNRL 415

Query: 359 YITSNVQFLNQSKVSSLMVIDHKEWDEEILTDLFNERDQRCIRKIRLRDDEERDQIYWSK 538
            IT  V   +  KV  L  I    W E+ + D F  RD   I  I L      DQI WS 
Sbjct: 416 IITPPVAGFDGIKVDEL--ITEGLWREDFIRDKFMARDADLILSIPLPMSSREDQISWSF 473

Query: 539 ESSGQYSVRSAYRLLQ 586
           ++ G+Y+ RS Y  L+
Sbjct: 474 DARGEYTARSGYGALR 489


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  167 bits (422), Expect = 2e-39
 Identities = 80/185 (43%), Positives = 115/185 (62%)
 Frame = +2

Query: 26   IHWMSWARLTRHKSSGGLGFRDFRDFNLAMLGKQGWRFLTNPDSLVSRVYKARYFQNGSF 205
            IHW +W  L   K  GG+GFRD R FN A+LG+Q WR +  P SL++RV KA+Y+ N  F
Sbjct: 840  IHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHDF 899

Query: 206  LDSSLGKNPSFIWRSIWEAKDLVSAGARWRVGSGESINIVGQPWLLDDNNPYITSNVQFL 385
            LD+ LG + S+ WRSIW +K L+  G  WR+G+G ++ I   PW+LD+   +ITS  +  
Sbjct: 900  LDAPLGVSTSYSWRSIWSSKALLKEGMVWRIGNGTNVRIWEDPWVLDELGRFITSE-KHG 958

Query: 386  NQSKVSSLMVIDHKEWDEEILTDLFNERDQRCIRKIRLRDDEERDQIYWSKESSGQYSVR 565
            N + VS L+  D  EW   ++  +FNERD +CI  I L     +D++ W+   +  YSV+
Sbjct: 959  NLNMVSELIDFDRMEWKVSLIETVFNERDIKCILSIPLSSLPLKDELTWAFTKNAHYSVK 1018

Query: 566  SAYRL 580
            +AY L
Sbjct: 1019 TAYML 1023


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  165 bits (417), Expect = 6e-39
 Identities = 88/196 (44%), Positives = 117/196 (59%), Gaps = 1/196 (0%)
 Frame = +2

Query: 2    SKPGERSGIHWMSWARLTRHKSSGGLGFRDFRDFNLAMLGKQGWRFLTNPDSLVSRVYKA 181
            S P  RS I WMSW ++ + K  GGLGFR   DFNLA+L KQG RFL N DSLV+ +++A
Sbjct: 1384 SNPQXRS-IRWMSWXKMCKQKKDGGLGFRKLEDFNLALLAKQGXRFLQNLDSLVTIIFQA 1442

Query: 182  RYFQNGSFLDSSLGKNPSFIWRSIWEAKDLVSAGARWRVGSGESINIVGQPWLLDDNNP- 358
            RYF+N SFL++ LG NPS++WRSI  A+DL+  G  W + SG  + + G  WL + +N  
Sbjct: 1443 RYFRNSSFLNAELGSNPSYMWRSILAAQDLLKMGCYWSIASGTKVQVWGDSWLPNSSNRL 1502

Query: 359  YITSNVQFLNQSKVSSLMVIDHKEWDEEILTDLFNERDQRCIRKIRLRDDEERDQIYWSK 538
             IT +V   +  KV  L  I    W E+ + D F  RD   I  I L      DQI WS 
Sbjct: 1503 IITPHVADFDGIKVDEL--ITKGLWHEDFIRDKFMGRDADLILSIPLPMSSREDQISWSF 1560

Query: 539  ESSGQYSVRSAYRLLQ 586
            ++ G+Y+ RS Y  L+
Sbjct: 1561 DARGEYTARSGYGALR 1576


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  165 bits (417), Expect = 6e-39
 Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
 Frame = +2

Query: 2   SKPGERSGIHWMSWARLTRHKSSGGLGFRDFRDFNLAMLGKQGWRFLTNPDSLVSRVYKA 181
           SK   R GI+WM W  LT HKS GGLGFR+   FNL+MLGKQGW+ L++  SL +R+ KA
Sbjct: 360 SKKNGRRGINWMRWDFLTLHKSLGGLGFRNLEAFNLSMLGKQGWKLLSDSSSLFTRILKA 419

Query: 182 RYFQNGSFLDSSLGKNPSFIWRSIWEAKDLVSAGARWRVGSGESINIVGQPWL--LDDNN 355
           +YF    FLD++LG NPS+ WRS+W  + L++ G RW++G G  IN+   PW+  L    
Sbjct: 420 KYFPRRDFLDATLGHNPSYTWRSLWSTQSLLTLGHRWKIGDGSKINVWSMPWIRNLLSLK 479

Query: 356 PYITSNVQFLNQSKVSSLMVIDHKEWDEEILTDLFNERDQRCIRKIRLRDDEERDQIYWS 535
           P  TS     +   V+SL+  D   WD  ++  LFN+ +   I    L      D   W 
Sbjct: 480 P-STSPPLHQHDLTVNSLLSADFNSWDTTLVQSLFNDAEAAAILSTPLFARSGSDVRIWK 538

Query: 536 KESSGQYSVRSAYRL 580
               G Y+V+SAYR+
Sbjct: 539 ATVDGTYTVKSAYRI 553


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/190 (42%), Positives = 115/190 (60%)
 Frame = +2

Query: 11   GERSGIHWMSWARLTRHKSSGGLGFRDFRDFNLAMLGKQGWRFLTNPDSLVSRVYKARYF 190
            G+   +HW+SW ++ + K  GG+GF+D   FN A+LGKQ WR L N +SL+SRV  A+Y+
Sbjct: 838  GDERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKYY 897

Query: 191  QNGSFLDSSLGKNPSFIWRSIWEAKDLVSAGARWRVGSGESINIVGQPWLLDDNNPYITS 370
             +G    + LG + S+ WRSIW AK LV  G  WRVG G  I+I   PW+ D+   +I S
Sbjct: 898  PHGDVRYARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEGRFIKS 957

Query: 371  NVQFLNQSKVSSLMVIDHKEWDEEILTDLFNERDQRCIRKIRLRDDEERDQIYWSKESSG 550
              +      V  LM ++ KEW+ E++   FNERDQ+CI  I L     +D++ W+    G
Sbjct: 958  -ARVEGLEVVGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDG 1016

Query: 551  QYSVRSAYRL 580
             YSV++AY L
Sbjct: 1017 TYSVKTAYML 1026