BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036165
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX79673.1| putative coat protein [Raphanus sativus cryptic v...   146   2e-33
gb|ABA46820.1| coat protein [Raphanus sativus cryptic virus 1]        146   2e-33
ref|YP_656505.1| coat protein [Raphanus sativus cryptic virus 1]...    75   7e-12

>gb|ABX79673.1| putative coat protein [Raphanus sativus cryptic virus 1]
          Length = 502

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/122 (55%), Positives = 88/122 (72%)
 Frame = -2

Query: 550 RCIATSTNIFTSPTWNSPXXXXXXXXXXXXXXXXHYTMRPNLSLTFRATTSVEDIPLAHF 371
           RCIAT TNIFT P WN+                 HY MR N  LTF+ATTSV ++PLAH+
Sbjct: 378 RCIATDTNIFTPPEWNAQQGTHTSFTHGDANQAGHYNMRHNAHLTFQATTSVHELPLAHY 437

Query: 370 YAATTFNLNLAASDAAVAQLCGGPFWNVHPDAWTKSGIQIYPGIQSSLARDYHSDSRIDA 191
           Y+A T+N+NLA S+AA+A  C G FWN+ PDA+T+SGIQIYPGI + +ARDYHS++RI++
Sbjct: 438 YSALTYNINLAESEAAMAATCRGTFWNIFPDAYTRSGIQIYPGIPALIARDYHSETRIES 497

Query: 190 DR 185
           +R
Sbjct: 498 ER 499


>gb|ABA46820.1| coat protein [Raphanus sativus cryptic virus 1]
          Length = 502

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/122 (55%), Positives = 88/122 (72%)
 Frame = -2

Query: 550 RCIATSTNIFTSPTWNSPXXXXXXXXXXXXXXXXHYTMRPNLSLTFRATTSVEDIPLAHF 371
           RCIAT TNIFT P WN+                 HY MR N  LTF+ATTSV ++PLAH+
Sbjct: 378 RCIATDTNIFTPPEWNAQQGAHTSFTHGDANQAGHYNMRHNAHLTFQATTSVHELPLAHY 437

Query: 370 YAATTFNLNLAASDAAVAQLCGGPFWNVHPDAWTKSGIQIYPGIQSSLARDYHSDSRIDA 191
           Y+A T+N+NLA S+AA+A  C G FWN+ PDA+T+SGIQIYPGI + +ARDYHS++RI++
Sbjct: 438 YSALTYNINLAESEAAMAATCRGTFWNIFPDAYTRSGIQIYPGIPALIARDYHSETRIES 497

Query: 190 DR 185
           +R
Sbjct: 498 ER 499


>ref|YP_656505.1| coat protein [Raphanus sativus cryptic virus 1]
           gi|76573429|gb|ABA46819.1| coat protein [Raphanus
           sativus cryptic virus 1]
          Length = 505

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 34/87 (39%), Positives = 51/87 (58%)
 Frame = -2

Query: 445 YTMRPNLSLTFRATTSVEDIPLAHFYAATTFNLNLAASDAAVAQLCGGPFWNVHPDAWTK 266
           Y   PN  L F A T +EDI  AH ++A TF+ NL    A  A    G FWN HP +++ 
Sbjct: 419 YYPNPNPVLIFDARTCIEDISSAHMFSAMTFHPNLIPYGANRANFLKGQFWNCHPPSYSA 478

Query: 265 SGIQIYPGIQSSLARDYHSDSRIDADR 185
              Q+YP + + +AR+YHS++ + +D+
Sbjct: 479 PAHQVYPAVSALIAREYHSETNLSSDK 505