BLASTX nr result

ID: Bupleurum21_contig00036046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036046
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    64   2e-08
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    61   8e-08
ref|XP_003622656.1| F-box/kelch-repeat protein [Medicago truncat...    60   1e-07
ref|XP_003622659.1| F-box protein [Medicago truncatula] gi|35549...    59   5e-07
ref|XP_003552622.1| PREDICTED: F-box/kelch-repeat protein At5g15...    58   9e-07

>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 43/107 (40%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
 Frame = +2

Query: 152 LPDDIIHNEILTRLPAKYIVRSRLVCKSWNSLLFNSLFVKSHLA-----RLHSYPYKDDD 316
           LP D+I  EI+ RLP K+I+R R VCKSWNSL+ +  FVK  L       LH   Y  D 
Sbjct: 29  LPSDVIP-EIICRLPVKFILRFRCVCKSWNSLISDPKFVKKQLCVSTTRNLHFRNYAYDS 87

Query: 317 EDLIIAKTEAFQRAIHIFSRANQIHVPLVPPFYATFLGSINGLVCMS 457
              I+           I S   Q   P    FY  F+GS NG+VC++
Sbjct: 88  RKYILTSYPLDSDFTDITSNFTQSDWPYA-KFY-RFIGSCNGIVCLA 132


>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
 Frame = +2

Query: 152 LPDDIIHNEILTRLPAKYIVRSRLVCKSWNSLLFNSLFVKSHLA-----RLHSYPYKDDD 316
           LP D+I  EI+ RLP K+I+R + VCKSWNSL+ +  FVK  L       LH   Y  D 
Sbjct: 29  LPSDVIL-EIICRLPVKFILRFQCVCKSWNSLISDPKFVKKQLCVSTTRNLHFLNYAYDS 87

Query: 317 EDLIIAKTEAFQRAIHIFSRANQIHVPLVPPFYATFLGSINGLVCMS 457
              I+           I S   Q   P    FY  F+GS NG+VC++
Sbjct: 88  RKYILTSYPLDSDFTDINSNFTQSDWPYA-KFY-RFIGSCNGIVCIA 132


>ref|XP_003622656.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355497671|gb|AES78874.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 512

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
 Frame = +2

Query: 152 LPDDIIHNEILTRLPAKYIVRSRLVCKSWNSLLFNSLFVKSHLARLHSYPYKDDDEDLII 331
           LPD++I  E+L+ LP K ++R R  CKSWNSL+ N LFVKSHL R    P       L  
Sbjct: 22  LPDELIV-EVLSFLPVKTLMRLRSCCKSWNSLVSNPLFVKSHLQRSTQNPNFTLGRTLCR 80

Query: 332 AKTEAFQRAIHIFSRANQIHVPLV---PPFY-------ATFLGSINGLVCM 454
             T     +   F  ++    P+     P+Y       +  +GS NGL+C+
Sbjct: 81  VDTSVLPISFDRFIESSCSSKPITLTNDPYYSLKDKDCSNVVGSYNGLICL 131


>ref|XP_003622659.1| F-box protein [Medicago truncatula] gi|355497674|gb|AES78877.1|
           F-box protein [Medicago truncatula]
          Length = 391

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
 Frame = +2

Query: 107 VNPMGKKRKRMSVEL----LPDDIIHNEILTRLPAKYIVRSRLVCKSWNSLLFNSLFVKS 274
           + P   +R   S+ L    LPD++I  E+L+ LP K ++R R  CKSWNSL+ + LFVKS
Sbjct: 3   LRPQKSQRPPNSMSLPTIFLPDELIV-EVLSFLPVKTLMRLRSCCKSWNSLVSDPLFVKS 61

Query: 275 HLARLHSYPYKDDDEDLIIAKTEAFQRAIHIFSRANQIHVPLV---PPFY-------ATF 424
           HL R    P       L    T     +   F  ++    P+     P+Y       +  
Sbjct: 62  HLQRSTQNPNFTLGRTLCRVDTSVLPISFDRFIESSCSTKPITLTNDPYYSLKDKDCSNV 121

Query: 425 LGSINGLVCM 454
           +GS NGL+C+
Sbjct: 122 VGSYNGLICL 131


>ref|XP_003552622.1| PREDICTED: F-box/kelch-repeat protein At5g15710-like [Glycine max]
          Length = 443

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
 Frame = +2

Query: 149 LLPDDIIHNEILTRLPAKYIVRSRLVCKSWNSLLFNSLFVKSHLARLHSYPYKDDDEDLI 328
           +LP+D++H EIL R+P   I R RLVCK WNSLL +S F+K H     S P         
Sbjct: 102 MLPEDLLH-EILARVPPFLIFRLRLVCKRWNSLLQDSSFLKFH----SSVPSHGPCLFTF 156

Query: 329 IAKTEAFQRAIHI--FSRANQIHVPLVPPFYATFLGSINGLVCMS 457
              T+  Q ++        N+I    +PP+    +GS  GLVC S
Sbjct: 157 WKNTQTPQCSVFSLPLKTWNRIPFTFLPPWAFWLVGSSGGLVCFS 201


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