BLASTX nr result

ID: Bupleurum21_contig00036027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036027
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...    62   5e-08
ref|XP_002315634.1| multidrug resistance protein ABC transporter...    62   6e-08
emb|CBI27547.3| unnamed protein product [Vitis vinifera]               60   2e-07

>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
 Frame = -2

Query: 306 VEFVRMLQL-ASMDINLKVAVNVGFSFFLLTWLVVEFWKQRRGDGGKNVSQRVNFESDST 130
           V F R L+  A MD +L + +NV F + LLTW++V   ++RR DGG   S+       ST
Sbjct: 2   VVFFRFLRWGALMDSSLGL-INVAFFWLLLTWVLVGVLRKRR-DGGGADSENEPTMRKST 59

Query: 129 AFTKITVLANVMILVSYIVYCAFSIWKLKILPYDSATSVVTW 4
            FT ++VL+N +I VS++ +C +  W L+ +      S +TW
Sbjct: 60  VFTVVSVLSNAIICVSHLGFCLYEFWSLETINLVHIFSAMTW 101


>ref|XP_002315634.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864674|gb|EEF01805.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 342

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/90 (34%), Positives = 51/90 (56%)
 Frame = -2

Query: 273 MDINLKVAVNVGFSFFLLTWLVVEFWKQRRGDGGKNVSQRVNFESDSTAFTKITVLANVM 94
           MDI++++ VN  F+  LL WL+V+  KQRRG G  +  +    +  +  FT + VL+N++
Sbjct: 10  MDISVEI-VNAAFAVLLLAWLLVDILKQRRGGGDLHSREHKAVKQPTVLFTTVAVLSNII 68

Query: 93  ILVSYIVYCAFSIWKLKILPYDSATSVVTW 4
           I + Y+ +  +  W L I+   S    VTW
Sbjct: 69  ISILYLGFGFYQYWDLGIVTSKSVFLSVTW 98


>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/90 (36%), Positives = 53/90 (58%)
 Frame = -2

Query: 273 MDINLKVAVNVGFSFFLLTWLVVEFWKQRRGDGGKNVSQRVNFESDSTAFTKITVLANVM 94
           MD +L + +NV F + LLTW++V   ++RR DGG   S+       ST FT ++VL+N +
Sbjct: 1   MDSSLGL-INVAFFWLLLTWVLVGVLRKRR-DGGGADSENEPTMRKSTVFTVVSVLSNAI 58

Query: 93  ILVSYIVYCAFSIWKLKILPYDSATSVVTW 4
           I VS++ +C +  W L+ +      S +TW
Sbjct: 59  ICVSHLGFCLYEFWSLETINLVHIFSAMTW 88


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