BLASTX nr result
ID: Bupleurum21_contig00036027
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00036027 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3... 62 5e-08 ref|XP_002315634.1| multidrug resistance protein ABC transporter... 62 6e-08 emb|CBI27547.3| unnamed protein product [Vitis vinifera] 60 2e-07 >ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1462 Score = 62.0 bits (149), Expect = 5e-08 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 1/102 (0%) Frame = -2 Query: 306 VEFVRMLQL-ASMDINLKVAVNVGFSFFLLTWLVVEFWKQRRGDGGKNVSQRVNFESDST 130 V F R L+ A MD +L + +NV F + LLTW++V ++RR DGG S+ ST Sbjct: 2 VVFFRFLRWGALMDSSLGL-INVAFFWLLLTWVLVGVLRKRR-DGGGADSENEPTMRKST 59 Query: 129 AFTKITVLANVMILVSYIVYCAFSIWKLKILPYDSATSVVTW 4 FT ++VL+N +I VS++ +C + W L+ + S +TW Sbjct: 60 VFTVVSVLSNAIICVSHLGFCLYEFWSLETINLVHIFSAMTW 101 >ref|XP_002315634.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222864674|gb|EEF01805.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 342 Score = 61.6 bits (148), Expect = 6e-08 Identities = 31/90 (34%), Positives = 51/90 (56%) Frame = -2 Query: 273 MDINLKVAVNVGFSFFLLTWLVVEFWKQRRGDGGKNVSQRVNFESDSTAFTKITVLANVM 94 MDI++++ VN F+ LL WL+V+ KQRRG G + + + + FT + VL+N++ Sbjct: 10 MDISVEI-VNAAFAVLLLAWLLVDILKQRRGGGDLHSREHKAVKQPTVLFTTVAVLSNII 68 Query: 93 ILVSYIVYCAFSIWKLKILPYDSATSVVTW 4 I + Y+ + + W L I+ S VTW Sbjct: 69 ISILYLGFGFYQYWDLGIVTSKSVFLSVTW 98 >emb|CBI27547.3| unnamed protein product [Vitis vinifera] Length = 1363 Score = 60.1 bits (144), Expect = 2e-07 Identities = 33/90 (36%), Positives = 53/90 (58%) Frame = -2 Query: 273 MDINLKVAVNVGFSFFLLTWLVVEFWKQRRGDGGKNVSQRVNFESDSTAFTKITVLANVM 94 MD +L + +NV F + LLTW++V ++RR DGG S+ ST FT ++VL+N + Sbjct: 1 MDSSLGL-INVAFFWLLLTWVLVGVLRKRR-DGGGADSENEPTMRKSTVFTVVSVLSNAI 58 Query: 93 ILVSYIVYCAFSIWKLKILPYDSATSVVTW 4 I VS++ +C + W L+ + S +TW Sbjct: 59 ICVSHLGFCLYEFWSLETINLVHIFSAMTW 88