BLASTX nr result

ID: Bupleurum21_contig00036024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036024
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39558.3| unnamed protein product [Vitis vinifera]              241   4e-62
ref|XP_002283093.1| PREDICTED: eukaryotic translation initiation...   241   4e-62
ref|XP_002330181.1| predicted protein [Populus trichocarpa] gi|2...   234   4e-60
ref|XP_002319496.1| predicted protein [Populus trichocarpa] gi|2...   234   5e-60
ref|XP_003521341.1| PREDICTED: eukaryotic translation initiation...   232   2e-59

>emb|CBI39558.3| unnamed protein product [Vitis vinifera]
          Length = 884

 Score =  241 bits (615), Expect = 4e-62
 Identities = 123/163 (75%), Positives = 139/163 (85%)
 Frame = -1

Query: 491 AKLTEIFWISTSHLYHAYTWFKLFQLQKSFNNNLNQKDLQLIXXXXXXXXXXVPPYDHTR 312
           AKLTEIFW+S+SHLYHAY WFKLF LQKSFN NL+QKDLQLI          V PYD TR
Sbjct: 278 AKLTEIFWVSSSHLYHAYAWFKLFSLQKSFNKNLSQKDLQLIASSVVLAALSVTPYDLTR 337

Query: 311 KASHLELEHEKERNVRMSNLIGFNLDAKIVGRDTLSRSSLLADLISKGVMTYVTQEVKDL 132
            ASHLELE+EKERN+RM+NLIGFNL+ K+ GR+ LSRS+LL++L+SKGVMT VTQEVKDL
Sbjct: 338 GASHLELENEKERNLRMANLIGFNLEPKLDGREVLSRSALLSELVSKGVMTCVTQEVKDL 397

Query: 131 YHLLEHEFLPLVLASKVQPLLTKILKVGGKISSASSVPEVQLS 3
           YHLLEHEFLPL LAS+VQPLL KI K+GGK+SSASSV EVQLS
Sbjct: 398 YHLLEHEFLPLDLASRVQPLLAKISKLGGKLSSASSVSEVQLS 440


>ref|XP_002283093.1| PREDICTED: eukaryotic translation initiation factor 3 subunit A
           [Vitis vinifera]
          Length = 977

 Score =  241 bits (615), Expect = 4e-62
 Identities = 123/163 (75%), Positives = 139/163 (85%)
 Frame = -1

Query: 491 AKLTEIFWISTSHLYHAYTWFKLFQLQKSFNNNLNQKDLQLIXXXXXXXXXXVPPYDHTR 312
           AKLTEIFW+S+SHLYHAY WFKLF LQKSFN NL+QKDLQLI          V PYD TR
Sbjct: 278 AKLTEIFWVSSSHLYHAYAWFKLFSLQKSFNKNLSQKDLQLIASSVVLAALSVTPYDLTR 337

Query: 311 KASHLELEHEKERNVRMSNLIGFNLDAKIVGRDTLSRSSLLADLISKGVMTYVTQEVKDL 132
            ASHLELE+EKERN+RM+NLIGFNL+ K+ GR+ LSRS+LL++L+SKGVMT VTQEVKDL
Sbjct: 338 GASHLELENEKERNLRMANLIGFNLEPKLDGREVLSRSALLSELVSKGVMTCVTQEVKDL 397

Query: 131 YHLLEHEFLPLVLASKVQPLLTKILKVGGKISSASSVPEVQLS 3
           YHLLEHEFLPL LAS+VQPLL KI K+GGK+SSASSV EVQLS
Sbjct: 398 YHLLEHEFLPLDLASRVQPLLAKISKLGGKLSSASSVSEVQLS 440


>ref|XP_002330181.1| predicted protein [Populus trichocarpa] gi|222871637|gb|EEF08768.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score =  234 bits (598), Expect = 4e-60
 Identities = 118/163 (72%), Positives = 136/163 (83%)
 Frame = -1

Query: 491 AKLTEIFWISTSHLYHAYTWFKLFQLQKSFNNNLNQKDLQLIXXXXXXXXXXVPPYDHTR 312
           AKLTEIFWIS+SHLYHAY W KLF LQKSFN NL+QKDLQ+I          V PYDHT+
Sbjct: 278 AKLTEIFWISSSHLYHAYAWLKLFTLQKSFNKNLSQKDLQIIASSVVLAALAVAPYDHTQ 337

Query: 311 KASHLELEHEKERNVRMSNLIGFNLDAKIVGRDTLSRSSLLADLISKGVMTYVTQEVKDL 132
            ASH+ELE+EKERN+RM+NLIGFNLD K   R+ LSRSSLL++L+SKGVM+  TQEVKDL
Sbjct: 338 GASHMELENEKERNMRMANLIGFNLDLKPESREVLSRSSLLSELVSKGVMSCATQEVKDL 397

Query: 131 YHLLEHEFLPLVLASKVQPLLTKILKVGGKISSASSVPEVQLS 3
           YHLLEHEFLPL L +KVQPLL+KI K+GGK++SASSVPEV LS
Sbjct: 398 YHLLEHEFLPLDLTAKVQPLLSKISKLGGKLTSASSVPEVHLS 440


>ref|XP_002319496.1| predicted protein [Populus trichocarpa] gi|222857872|gb|EEE95419.1|
           predicted protein [Populus trichocarpa]
          Length = 994

 Score =  234 bits (597), Expect = 5e-60
 Identities = 119/163 (73%), Positives = 135/163 (82%)
 Frame = -1

Query: 491 AKLTEIFWISTSHLYHAYTWFKLFQLQKSFNNNLNQKDLQLIXXXXXXXXXXVPPYDHTR 312
           AKLTEIFWIS+SHLYHAY W KLF LQKSFN NL+QKDLQ+I          V PYDHT 
Sbjct: 278 AKLTEIFWISSSHLYHAYAWLKLFTLQKSFNKNLSQKDLQMIASSVVLAALAVAPYDHTY 337

Query: 311 KASHLELEHEKERNVRMSNLIGFNLDAKIVGRDTLSRSSLLADLISKGVMTYVTQEVKDL 132
            ASHLELE+EKERN+RM+NLIGFNLD K   R+ LSRSSLL++L+SKGVM+ VTQEVKDL
Sbjct: 338 GASHLELENEKERNLRMANLIGFNLDLKPESREVLSRSSLLSELVSKGVMSCVTQEVKDL 397

Query: 131 YHLLEHEFLPLVLASKVQPLLTKILKVGGKISSASSVPEVQLS 3
           YHLLEHEFLPL L +KVQPLL+KI K+GGK+ SASS+PEV LS
Sbjct: 398 YHLLEHEFLPLDLTAKVQPLLSKISKLGGKLGSASSLPEVHLS 440


>ref|XP_003521341.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           A-like [Glycine max]
          Length = 958

 Score =  232 bits (592), Expect = 2e-59
 Identities = 118/162 (72%), Positives = 133/162 (82%)
 Frame = -1

Query: 488 KLTEIFWISTSHLYHAYTWFKLFQLQKSFNNNLNQKDLQLIXXXXXXXXXXVPPYDHTRK 309
           KLTEIFWIS+SHLYHAY WFKLF LQKSFN NL+QKDLQLI          VPP+DHT  
Sbjct: 279 KLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTHG 338

Query: 308 ASHLELEHEKERNVRMSNLIGFNLDAKIVGRDTLSRSSLLADLISKGVMTYVTQEVKDLY 129
           ASHLELEHEKERN+RM+NLIGFNL+ K   R+ LSRSSLLA+L SKGVM+ VTQEVKD+Y
Sbjct: 339 ASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVTQEVKDIY 398

Query: 128 HLLEHEFLPLVLASKVQPLLTKILKVGGKISSASSVPEVQLS 3
           HLLEHEF P  LA K  PL+TKI K+GGK+S+ASSVPEVQL+
Sbjct: 399 HLLEHEFYPSDLALKALPLITKISKLGGKLSTASSVPEVQLA 440


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