BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036007
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520950.1| pentatricopeptide repeat-containing protein,...   246   3e-63
ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...   244   1e-62
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]   244   1e-62
ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|2...   240   1e-61
ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containi...   231   9e-59

>ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539787|gb|EEF41367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  246 bits (628), Expect = 3e-63
 Identities = 114/215 (53%), Positives = 159/215 (73%)
 Frame = +3

Query: 3   TTVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR 182
           TT  AGYAQN   L+A++  R+  MEG++VD+ MIGSIL AC GLNC+  +KE+H YT+R
Sbjct: 331 TTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIR 390

Query: 183 RKLSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
             LSD VL+N ++D+YGE G IDYA  +FE I+ KDVVSWTSM+SCYV+N L+N+AL +F
Sbjct: 391 GGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVF 450

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
            SM   G+E                   +KGKE+HGF+IR GF+ EGS++ +LVDMYA C
Sbjct: 451 SSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARC 510

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMHGYGE 647
           G++++++K+F+C +N++++LWT+MI+A GMHGYGE
Sbjct: 511 GSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGE 545



 Score =  101 bits (252), Expect = 1e-19
 Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
 Frame = +3

Query: 6   TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRR 185
           +++ G+ QN    +A++ F       +  D + I SI+ A   L  +   KE+HAY ++ 
Sbjct: 231 SMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKN 290

Query: 186 KL-SDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
              S++++ N L+D+Y +   + Y    F+L+  KD++SWT+  + Y  N+   +AL L 
Sbjct: 291 GFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELL 350

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             +   G++                    K KE+HG+ IR G L++  +  +++D+Y  C
Sbjct: 351 RQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGG-LSDPVLQNTIIDVYGEC 409

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMH 635
           G I  + ++F  +E KD+V WTSMI +C +H
Sbjct: 410 GIIDYAVRIFESIECKDVVSWTSMI-SCYVH 439



 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
 Frame = +3

Query: 6   TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRR 185
           ++I+ Y+ N    +A+  F + L  GV  ++    + LQAC   + I L  ++HA  ++ 
Sbjct: 130 SIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKS 189

Query: 186 -KLSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
            ++ D+ + N L+ +Y   G +  A  +F  ++ KD+V+W SM++ ++ N L +EAL  F
Sbjct: 190 GRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFF 249

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             +    ++                     GKE+H + I+NGF +   V  +L+DMYA C
Sbjct: 250 YDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKC 309

Query: 543 GAIQNSWKVFSCVENKDIVLWTS 611
             +    + F  + +KD++ WT+
Sbjct: 310 CCMSYGGRAFDLMAHKDLISWTT 332



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 2/212 (0%)
 Frame = +3

Query: 9   VIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRRK 188
           ++ GY  N   L A++ +R+    GV+ DS     +L+AC  +  +    E+H   ++  
Sbjct: 29  MMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYG 88

Query: 189 LSDLV-LENRLLDLYGESGYIDYACHVFELIKVK-DVVSWTSMMSCYVNNRLSNEALVLF 362
               V + N L+ LY +   I+ A  +F+ + V+ DVVSW S++S Y  N +  EAL LF
Sbjct: 89  CDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLF 148

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             M+  G+                    + G ++H  ++++G + +  VA +LV MY   
Sbjct: 149 SEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRF 208

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMHG 638
           G +  +  +F  +E KDIV W SM+     +G
Sbjct: 209 GKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/124 (28%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3   TTVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR 182
           T++I+ Y  N    KA++ F      G+  D + + SIL A   L+ +   KE+H + +R
Sbjct: 431 TSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIR 490

Query: 183 RK-LSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVL 359
           +  + +  + N L+D+Y   G ++ A  +F   K ++++ WT+M+S Y  +     A+ L
Sbjct: 491 KGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVEL 550

Query: 360 FISM 371
           F+ M
Sbjct: 551 FMRM 554



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
 Frame = +3

Query: 225 LYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLFISMIAVGIEXXXXX 404
           +YG+ G +  A  +F+ +  + + +W +MM  YV+N  +  AL ++  M  +G+      
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 405 XXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACCGAIQNSWKVFS-CV 581
                           G E+HG  I+ G  +   V  SLV +YA C  I  + K+F    
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 582 ENKDIVLWTSMINACGMHG 638
              D+V W S+I+A   +G
Sbjct: 121 VRNDVVSWNSIISAYSGNG 139


>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Vitis vinifera]
          Length = 993

 Score =  244 bits (622), Expect = 1e-62
 Identities = 120/214 (56%), Positives = 157/214 (73%)
 Frame = +3

Query: 3    TTVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR 182
            TT+IAG+AQN S+ +A++ FR+  +EG+++D +MI SIL ACSGL  IS VKE+H+Y +R
Sbjct: 489  TTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR 548

Query: 183  RKLSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
            + LSDLVL+N ++D+YGE G +DYA  +FELI+ KDVVSWTSM+SCYV+N L+NEAL LF
Sbjct: 549  KGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELF 608

Query: 363  ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
              M   G+E                   +KGKE+HGFLIR GF+ EGS+A +LVDMYA C
Sbjct: 609  HLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARC 668

Query: 543  GAIQNSWKVFSCVENKDIVLWTSMINACGMHGYG 644
            G ++ S  VF+ + NKD+VLWTSMINA GMHG G
Sbjct: 669  GTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCG 702



 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
 Frame = +3

Query: 6    TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRR 185
            ++++G+ QN    +A++ + +    G   D + + SI+ A +         ++HAY M+ 
Sbjct: 389  SMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKN 448

Query: 186  KL-SDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
             L SDL + N L+D+Y +   + Y   +F+ +  KDVVSWT++++ +  N   + AL LF
Sbjct: 449  GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELF 508

Query: 363  ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
              +   GI+                      KE+H ++IR G L++  +   +VD+Y  C
Sbjct: 509  REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGEC 567

Query: 543  GAIQNSWKVFSCVENKDIVLWTSMINACGMH 635
            G +  + ++F  +E KD+V WTSMI +C +H
Sbjct: 568  GNVDYAARMFELIEFKDVVSWTSMI-SCYVH 597



 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
 Frame = +3

Query: 6   TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRR 185
           ++I+ Y+ N  +++A++ F +     +  ++    + LQAC   + I     +HA  ++ 
Sbjct: 288 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 347

Query: 186 KLS-DLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
               ++ + N L+ +Y   G +  A ++F  +   D +SW SM+S +V N L +EAL  +
Sbjct: 348 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             M   G +                     G ++H + ++NG  ++  V  SLVDMYA  
Sbjct: 408 HEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 467

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMHG 638
            +++    +F  + +KD+V WT++I     +G
Sbjct: 468 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 499



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
 Frame = +3

Query: 111 SILQACSGLNCISLVKELHAY--TMRRKLSDLVLENRLLDLYGESGYIDYACHVFELIKV 284
           S+L+ C     +S  +++HA+  T     + + L  RL+ +YG+ G +  A  +F+ +  
Sbjct: 119 SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPH 178

Query: 285 KDVVSWTSMMSCYVNNRLSNEALVLFISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKEL 464
           K + +W +M+  YV N     +L L+  M   GI                    R G E+
Sbjct: 179 KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEV 238

Query: 465 HGFLIRNGFLTEGSVAGSLVDMYACCGAIQNSWKVFSCV-ENKDIVLWTSMINACGMHG 638
           HG  I+ G+++   VA S+V MY  C  +  + ++F  + E +D+V W SMI+A   +G
Sbjct: 239 HGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNG 297



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
 Frame = +3

Query: 9   VIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRRK 188
           +I  Y  N   L +++ +R+  + G+ +D+     IL+AC  L       E+H   ++  
Sbjct: 187 MIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEG 246

Query: 189 LSDLV-LENRLLDLYGESGYIDYACHVFELIKVK-DVVSWTSMMSCYVNNRLSNEALVLF 362
              +V + N ++ +Y +   ++ A  +F+ +  K DVVSW SM+S Y +N  S EAL LF
Sbjct: 247 YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLF 306

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             M    +                    ++G  +H  ++++ +     VA +L+ MYA  
Sbjct: 307 GEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARF 366

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMHG 638
           G +  +  +F  +++ D + W SM++    +G
Sbjct: 367 GKMGEAANIFYNMDDWDTISWNSMLSGFVQNG 398



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3   TTVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR 182
           T++I+ Y  N    +A++ F      GV  DS+ + SIL A + L+ +   KE+H + +R
Sbjct: 589 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 648

Query: 183 RK-LSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVL 359
           +  + +  L + L+D+Y   G ++ + +VF  I+ KD+V WTSM++ Y  +     A+ L
Sbjct: 649 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 708

Query: 360 FISM 371
           F  M
Sbjct: 709 FRRM 712


>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  244 bits (622), Expect = 1e-62
 Identities = 120/214 (56%), Positives = 157/214 (73%)
 Frame = +3

Query: 3    TTVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR 182
            TT+IAG+AQN S+ +A++ FR+  +EG+++D +MI SIL ACSGL  IS VKE+H+Y +R
Sbjct: 453  TTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR 512

Query: 183  RKLSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
            + LSDLVL+N ++D+YGE G +DYA  +FELI+ KDVVSWTSM+SCYV+N L+NEAL LF
Sbjct: 513  KGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELF 572

Query: 363  ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
              M   G+E                   +KGKE+HGFLIR GF+ EGS+A +LVDMYA C
Sbjct: 573  HLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARC 632

Query: 543  GAIQNSWKVFSCVENKDIVLWTSMINACGMHGYG 644
            G ++ S  VF+ + NKD+VLWTSMINA GMHG G
Sbjct: 633  GTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCG 666



 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
 Frame = +3

Query: 6   TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRR 185
           ++++G+ QN    +A++ + +    G   D + + SI+ A +         ++HAY M+ 
Sbjct: 353 SMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKN 412

Query: 186 KL-SDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
            L SDL + N L+D+Y +   + Y   +F+ +  KDVVSWT++++ +  N   + AL LF
Sbjct: 413 GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELF 472

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             +   GI+                      KE+H ++IR G L++  +   +VD+Y  C
Sbjct: 473 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGEC 531

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMH 635
           G +  + ++F  +E KD+V WTSMI +C +H
Sbjct: 532 GNVDYAARMFELIEFKDVVSWTSMI-SCYVH 561



 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
 Frame = +3

Query: 6   TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRR 185
           ++I+ Y+ N  +++A++ F +     +  ++    + LQAC   + I     +HA  ++ 
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 311

Query: 186 KLS-DLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
               ++ + N L+ +Y   G +  A ++F  +   D +SW SM+S +V N L +EAL  +
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             M   G +                     G ++H + ++NG  ++  V  SLVDMYA  
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 431

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMHG 638
            +++    +F  + +KD+V WT++I     +G
Sbjct: 432 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 463



 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
 Frame = +3

Query: 111 SILQACSGLNCISLVKELHAY--TMRRKLSDLVLENRLLDLYGESGYIDYACHVFELIKV 284
           S+L+ C     +S  +++HA+  T     + + L  RL+ +YG+ G +  A  +F+ +  
Sbjct: 83  SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPH 142

Query: 285 KDVVSWTSMMSCYVNNRLSNEALVLFISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKEL 464
           K + +W +M+  YV N     +L L+  M   GI                    R G E+
Sbjct: 143 KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEV 202

Query: 465 HGFLIRNGFLTEGSVAGSLVDMYACCGAIQNSWKVFSCV-ENKDIVLWTSMINACGMHG 638
           HG  I+ G+++   VA S+V MY  C  +  + ++F  + E +D+V W SMI+A   +G
Sbjct: 203 HGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNG 261



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
 Frame = +3

Query: 9   VIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRRK 188
           +I  Y  N   L +++ +R+  + G+ +D+     IL+AC  L       E+H   ++  
Sbjct: 151 MIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEG 210

Query: 189 LSDLV-LENRLLDLYGESGYIDYACHVFELIKVK-DVVSWTSMMSCYVNNRLSNEALVLF 362
              +V + N ++ +Y +   ++ A  +F+ +  K DVVSW SM+S Y +N  S EAL LF
Sbjct: 211 YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLF 270

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             M    +                    ++G  +H  ++++ +     VA +L+ MYA  
Sbjct: 271 GEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARF 330

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMHG 638
           G +  +  +F  +++ D + W SM++    +G
Sbjct: 331 GKMGEAANIFYNMDDWDTISWNSMLSGFVQNG 362



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3   TTVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR 182
           T++I+ Y  N    +A++ F      GV  DS+ + SIL A + L+ +   KE+H + +R
Sbjct: 553 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 612

Query: 183 RK-LSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVL 359
           +  + +  L + L+D+Y   G ++ + +VF  I+ KD+V WTSM++ Y  +     A+ L
Sbjct: 613 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 672

Query: 360 FISM 371
           F  M
Sbjct: 673 FRRM 676


>ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|222856250|gb|EEE93797.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score =  240 bits (613), Expect = 1e-61
 Identities = 114/215 (53%), Positives = 152/215 (70%)
 Frame = +3

Query: 3   TTVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR 182
           TTVIA YAQNN + +A+K  RK   +G++VD++MIGS L ACSGL C+S  KE+H YT++
Sbjct: 283 TTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLK 342

Query: 183 RKLSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
           R LSDL+++N ++D+Y + G I+YA  +FE IK KDVVSWTSM+SCYV+N L+NEAL +F
Sbjct: 343 RGLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVF 402

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             M    +E                    KGKE+HGF+ R GF+ EGS   SLVDMYACC
Sbjct: 403 YLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACC 462

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMHGYGE 647
           G+++N++KVF C  +K +VLWT+MINA GMHG G+
Sbjct: 463 GSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGK 497



 Score =  105 bits (261), Expect = 9e-21
 Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 1/211 (0%)
 Frame = +3

Query: 6   TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRR 185
           ++IAG+ QN    +A++ F       +  D + + SIL A   L  +   KE+HAY M+ 
Sbjct: 183 SMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKN 242

Query: 186 KL-SDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
            L S+L + N L+D+Y +   + YA  VF+ +  KD++SWT++++ Y  N    EAL L 
Sbjct: 243 WLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLL 302

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             +   G++                      KE+HG+ ++ G L++  +   ++D+YA C
Sbjct: 303 RKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG-LSDLMMQNMIIDVYADC 361

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMH 635
           G I  + ++F  ++ KD+V WTSMI +C +H
Sbjct: 362 GNINYATRMFESIKCKDVVSWTSMI-SCYVH 391



 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 54/207 (26%), Positives = 105/207 (50%), Gaps = 1/207 (0%)
 Frame = +3

Query: 6   TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR- 182
           ++I+ Y+ N   ++A+  FR+    GV  ++  + + LQAC   +   L  E+HA  ++ 
Sbjct: 82  SIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKS 141

Query: 183 RKLSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
            ++ D+ + N L+ ++   G + YA  +F+ +  KD ++W SM++ +  N L NEAL  F
Sbjct: 142 NQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFF 201

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             +    ++                     GKE+H + ++N   +   +  +L+DMY+ C
Sbjct: 202 CGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKC 261

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINA 623
             +  +  VF  + NKD++ WT++I A
Sbjct: 262 CCVAYAGLVFDKMINKDLISWTTVIAA 288



 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
 Frame = +3

Query: 81  GVNVDSLMIGSILQACSGLNCISLVKELHAYTMRRKLSDLV-LENRLLDLYGESGYIDYA 257
           GV  DS     +L+AC  +  I    E+H   ++     +V + N L+ +Y +   I  A
Sbjct: 5   GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64

Query: 258 CHVFELIKVK-DVVSWTSMMSCYVNNRLSNEALVLFISMIAVGIEXXXXXXXXXXXXXXX 434
             +F+ +  + DVVSW S++S Y  N    EAL LF  M   G+                
Sbjct: 65  RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 435 XXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACCGAIQNSWKVFSCVENKDIVLWTSM 614
               + G E+H  ++++  + +  VA +LV M+   G +  + ++F  ++ KD + W SM
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184

Query: 615 INACGMHG 638
           I     +G
Sbjct: 185 IAGFTQNG 192


>ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Glycine max]
          Length = 923

 Score =  231 bits (589), Expect = 9e-59
 Identities = 109/214 (50%), Positives = 151/214 (70%)
 Frame = +3

Query: 3    TTVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR 182
            TT+IAGYAQN  +L+A+  FRK  ++G++VD +MIGS+L+ACSGL   + ++E+H Y  +
Sbjct: 419  TTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFK 478

Query: 183  RKLSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
            R L+D++L+N ++++YGE G+IDYA   FE I+ KD+VSWTSM++C V+N L  EAL LF
Sbjct: 479  RDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELF 538

Query: 363  ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             S+    I+                   +KGKE+HGFLIR GF  EG +A SLVDMYACC
Sbjct: 539  YSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACC 598

Query: 543  GAIQNSWKVFSCVENKDIVLWTSMINACGMHGYG 644
            G ++NS K+F  V+ +D++LWTSMINA GMHG G
Sbjct: 599  GTVENSRKMFHSVKQRDLILWTSMINANGMHGCG 632



 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
 Frame = +3

Query: 6   TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRR 185
           T+++G  QN     A+  FR     G   D + + +++ A      +   KE+HAY +R 
Sbjct: 319 TLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRN 378

Query: 186 KL-SDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
            L S++ + N L+D+Y +   + Y  H FE +  KD++SWT++++ Y  N    EA+ LF
Sbjct: 379 GLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLF 438

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             +   G++                      +E+HG++ +   L +  +  ++V++Y   
Sbjct: 439 RKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD-LADIMLQNAIVNVYGEV 497

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMINACGMHG 638
           G I  + + F  + +KDIV WTSMI  C  +G
Sbjct: 498 GHIDYARRAFESIRSKDIVSWTSMITCCVHNG 529



 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
 Frame = +3

Query: 6   TVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRR 185
           ++I+ +    + L+A+  FR+    GV  ++    + LQ     + + L   +H   ++ 
Sbjct: 218 SIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKS 277

Query: 186 K-LSDLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVLF 362
              +D+ + N L+ +Y + G ++ A  VFE +  +D VSW +++S  V N L ++AL  F
Sbjct: 278 NHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYF 337

Query: 363 ISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYACC 542
             M   G +                    KGKE+H + IRNG  +   +  +LVDMYA C
Sbjct: 338 RDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKC 397

Query: 543 GAIQNSWKVFSCVENKDIVLWTSMI 617
             ++     F C+  KD++ WT++I
Sbjct: 398 CCVKYMGHAFECMHEKDLISWTTII 422



 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 52/207 (25%), Positives = 104/207 (50%), Gaps = 3/207 (1%)
 Frame = +3

Query: 9   VIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMRRK 188
           ++  +  +   L+A++ ++   + GV +D+    S+L+AC  L    L  E+H   ++  
Sbjct: 116 LMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCG 175

Query: 189 LSDLVLE-NRLLDLYGESGYIDYACHVFE--LIKVKDVVSWTSMMSCYVNNRLSNEALVL 359
             + V   N L+ +YG+ G +  A  +F+  +++ +D VSW S++S +V      EAL L
Sbjct: 176 YGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSL 235

Query: 360 FISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGFLIRNGFLTEGSVAGSLVDMYAC 539
           F  M  VG+                    + G  +HG ++++    +  VA +L+ MYA 
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAK 295

Query: 540 CGAIQNSWKVFSCVENKDIVLWTSMIN 620
           CG ++++ +VF  +  +D V W ++++
Sbjct: 296 CGRMEDAGRVFESMLCRDYVSWNTLLS 322



 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 114 ILQACSGLNCISLVKELHAYTMRRKLSDLVLENRLLDLYGESGYIDYACHVFELIKVKDV 293
           +L  C     +   ++LHA  ++  LS   L  +L+ +YG+ G +  A  VF+ +  + +
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKSHLSAF-LATKLVLMYGKCGSLRDAVKVFDEMSERTI 110

Query: 294 VSWTSMMSCYVNNRLSNEALVLFISMIAVGIEXXXXXXXXXXXXXXXXXXXRKGKELHGF 473
            SW ++M  +V++    EA+ L+  M  +G+                    R G E+HG 
Sbjct: 111 FSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV 170

Query: 474 LIRNGFLTEGSVAGSLVDMYACCGAIQNSWKVFS--CVENKDIVLWTSMINA 623
            ++ G+     V  +L+ MY  CG +  +  +F    +E +D V W S+I+A
Sbjct: 171 AVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 32/124 (25%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3   TTVIAGYAQNNSNLKAVKKFRKALMEGVNVDSLMIGSILQACSGLNCISLVKELHAYTMR 182
           T++I     N   ++A++ F       +  DS+ I S L A + L+ +   KE+H + +R
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578

Query: 183 RKLS-DLVLENRLLDLYGESGYIDYACHVFELIKVKDVVSWTSMMSCYVNNRLSNEALVL 359
           +    +  + + L+D+Y   G ++ +  +F  +K +D++ WTSM++    +   N+A+ L
Sbjct: 579 KGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIAL 638

Query: 360 FISM 371
           F  M
Sbjct: 639 FKKM 642