BLASTX nr result

ID: Bupleurum21_contig00036005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036005
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   118   4e-25
gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japo...   117   1e-24
ref|NP_001064277.2| Os10g0191000 [Oryza sativa Japonica Group] g...   117   1e-24
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...   117   1e-24
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi...   117   1e-24

>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  118 bits (296), Expect = 4e-25
 Identities = 66/138 (47%), Positives = 82/138 (59%), Gaps = 36/138 (26%)
 Frame = -2

Query: 318  KPVEGIEVKAALFNMHPDKSPGPDD----------------------------------- 244
            +P    EVK ALF MHPDKSPG D                                    
Sbjct: 718  RPFAVEEVKDALFAMHPDKSPGNDGFSPGFYQRHWEIVGEDVANACIGWLNDGMFPDSLT 777

Query: 243  -TNIALIPKKNCPVVMQDLRPISLCNVVYKICSKVLANRLKKVIDKVISDTQSAFIPGRL 67
             TNI LIPKK+  + M DLRPISLCNV++KI SK+L NRLKKV+D V+S+ QSAF+P R 
Sbjct: 778  RTNIVLIPKKSEVISMTDLRPISLCNVIFKIASKLLTNRLKKVLDGVVSEAQSAFVPRRS 837

Query: 66   ITDNIMISYEVMHYMKRK 13
            I DNI+I++EV+H++KRK
Sbjct: 838  IIDNILIAHEVLHFLKRK 855


>gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 566

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = -2

Query: 255 GPDDTNIALIPKKNCPVVMQDLRPISLCNVVYKICSKVLANRLKKVIDKVISDTQSAFIP 76
           G +DTNI LIPK   P V+++LRP SLCNVVYKI SKVLANRLK ++ ++I DTQSAF+P
Sbjct: 4   GWNDTNIVLIPKVKSPSVLKELRPSSLCNVVYKIISKVLANRLKSILPEIILDTQSAFVP 63

Query: 75  GRLITDNIMISYEVMHYMKRKTKGK 1
           GRLITDN++I+YE  H+++ K  GK
Sbjct: 64  GRLITDNVLIAYEATHFLQNKRNGK 88


>ref|NP_001064277.2| Os10g0191000 [Oryza sativa Japonica Group]
           gi|255679263|dbj|BAF26191.2| Os10g0191000 [Oryza sativa
           Japonica Group]
          Length = 527

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = -2

Query: 255 GPDDTNIALIPKKNCPVVMQDLRPISLCNVVYKICSKVLANRLKKVIDKVISDTQSAFIP 76
           G +DTNI LIPK   P V+++LRP SLCNVVYKI SKVLANRLK ++ ++I DTQSAF+P
Sbjct: 4   GWNDTNIVLIPKVKSPSVLKELRPSSLCNVVYKIISKVLANRLKSILPEIILDTQSAFVP 63

Query: 75  GRLITDNIMISYEVMHYMKRKTKGK 1
           GRLITDN++I+YE  H+++ K  GK
Sbjct: 64  GRLITDNVLIAYEATHFLQNKRNGK 88


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = -2

Query: 255 GPDDTNIALIPKKNCPVVMQDLRPISLCNVVYKICSKVLANRLKKVIDKVISDTQSAFIP 76
           G +DTNI LIPK   P V+++LRP SLCNVVYKI SKVLANRLK ++ ++I DTQSAF+P
Sbjct: 4   GWNDTNIVLIPKVKSPSVLKELRPSSLCNVVYKIISKVLANRLKSILPEIILDTQSAFVP 63

Query: 75  GRLITDNIMISYEVMHYMKRKTKGK 1
           GRLITDN++I+YE  H+++ K  GK
Sbjct: 64  GRLITDNVLIAYEATHFLQNKRNGK 88


>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
          Length = 697

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = -2

Query: 255 GPDDTNIALIPKKNCPVVMQDLRPISLCNVVYKICSKVLANRLKKVIDKVISDTQSAFIP 76
           G +DTNI LIPK   P V+++LRP SLCNVVYKI SKVLANRLK ++ ++I DTQSAF+P
Sbjct: 4   GWNDTNIVLIPKVKSPSVLKELRPSSLCNVVYKIISKVLANRLKSILPEIILDTQSAFVP 63

Query: 75  GRLITDNIMISYEVMHYMKRKTKGK 1
           GRLITDN++I+YE  H+++ K  GK
Sbjct: 64  GRLITDNVLIAYEATHFLQNKRNGK 88


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