BLASTX nr result

ID: Bupleurum21_contig00035998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035998
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280434.1| PREDICTED: uncharacterized protein LOC100259...   158   4e-37
ref|XP_004135671.1| PREDICTED: uncharacterized protein LOC101220...   144   6e-33
ref|XP_002325027.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_003532474.1| PREDICTED: uncharacterized protein LOC100803...   138   4e-31
ref|XP_003547745.1| PREDICTED: uncharacterized protein LOC100784...   137   9e-31

>ref|XP_002280434.1| PREDICTED: uncharacterized protein LOC100259546 [Vitis vinifera]
           gi|297738757|emb|CBI28002.3| unnamed protein product
           [Vitis vinifera]
          Length = 379

 Score =  158 bits (400), Expect = 4e-37
 Identities = 83/133 (62%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
 Frame = +3

Query: 75  MNCFKSKKPSKQLSPTQTSS-PMAPKPSKQNIPELRNVKHEVLLRIPGCKVHLIDEGEAL 251
           M CF  KK  K  SP QTS    A  P+ Q   E +++K E+LL+IP C VHL++EGEA+
Sbjct: 1   MGCFGQKK-FKTPSPPQTSDYEEAAFPANQGNLEPKSLKQELLLQIPACTVHLMEEGEAV 59

Query: 252 ELSNGDFTLFCISEDNVSIATTIKVGDDLQWPLTKDEPVVKLDAFHYLFSLPMKGRTSLS 431
           EL+NG+FTL  IS++NV +AT IKVGDDLQWPLTKDEPVVKLD+ HYLFSLPMK    LS
Sbjct: 60  ELANGEFTLLRISDENVFLATIIKVGDDLQWPLTKDEPVVKLDSLHYLFSLPMKDGDPLS 119

Query: 432 YGVTFSQQNSGSL 470
           YGVTFS+Q+ G+L
Sbjct: 120 YGVTFSEQHGGNL 132


>ref|XP_004135671.1| PREDICTED: uncharacterized protein LOC101220646 [Cucumis sativus]
           gi|449485818|ref|XP_004157282.1| PREDICTED:
           uncharacterized protein LOC101226428 [Cucumis sativus]
          Length = 376

 Score =  144 bits (364), Expect = 6e-33
 Identities = 73/132 (55%), Positives = 95/132 (71%)
 Frame = +3

Query: 75  MNCFKSKKPSKQLSPTQTSSPMAPKPSKQNIPELRNVKHEVLLRIPGCKVHLIDEGEALE 254
           M CF  +    Q S   ++S  +P+ +    P+   +K E+LL+I GC+VHL+D GEALE
Sbjct: 1   MGCFNFRSSKSQASMKPSNSIQSPRRN----PDPEQLKQEILLQIQGCRVHLMDGGEALE 56

Query: 255 LSNGDFTLFCISEDNVSIATTIKVGDDLQWPLTKDEPVVKLDAFHYLFSLPMKGRTSLSY 434
           L+NG+F L  I E+ VS+AT +KVGDDLQWPLTKDEPVVKL++ +YLFSLPM+    LSY
Sbjct: 57  LANGEFKLERILENEVSLATIVKVGDDLQWPLTKDEPVVKLNSLNYLFSLPMRDGDPLSY 116

Query: 435 GVTFSQQNSGSL 470
           GVTF +QNS SL
Sbjct: 117 GVTFLEQNSSSL 128


>ref|XP_002325027.1| predicted protein [Populus trichocarpa] gi|222866461|gb|EEF03592.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  142 bits (359), Expect = 2e-32
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
 Frame = +3

Query: 102 SKQLSPTQTSSPMAPKPSKQNIPE-LRNVKHEVLLRIPGCKVHLIDEGEALELSNGDFTL 278
           SK  S  +T++P A   S+Q  P   +N+KHE+LL+IP C VHL++ GEALE++ GDF+L
Sbjct: 2   SKTTSNKKTTTPEADFLSQQQNPSGPKNLKHELLLQIPACTVHLMEAGEALEIAKGDFSL 61

Query: 279 FCISEDNVSIATTIKVGDDLQWPLTKDEPVVKLDAFHYLFSLPMKGRTSLSYGVTFSQQN 458
             I ++N+S+AT +K+GDDLQWPLTKDEPVVKLD  HYLFSLPMK    LSYGV F  + 
Sbjct: 62  VRILDENISLATIVKIGDDLQWPLTKDEPVVKLDVLHYLFSLPMKDGDPLSYGVAFLDEY 121

Query: 459 SGSL 470
             SL
Sbjct: 122 GSSL 125


>ref|XP_003532474.1| PREDICTED: uncharacterized protein LOC100803010 [Glycine max]
          Length = 369

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/114 (60%), Positives = 85/114 (74%)
 Frame = +3

Query: 129 SSPMAPKPSKQNIPELRNVKHEVLLRIPGCKVHLIDEGEALELSNGDFTLFCISEDNVSI 308
           S+ + P  +  ++ E   +K EVL++IP CKVHL+DEGEALELS G F +    E+NVS+
Sbjct: 8   STAIPPPMAALSVGEYSGLKQEVLMQIPACKVHLMDEGEALELSQGHFMIIKTFEENVSL 67

Query: 309 ATTIKVGDDLQWPLTKDEPVVKLDAFHYLFSLPMKGRTSLSYGVTFSQQNSGSL 470
           AT IKVGDDLQWPLTKD PVVKLD+ HYLFSL +K    LSYGVTFS+ + GSL
Sbjct: 68  ATIIKVGDDLQWPLTKDMPVVKLDSLHYLFSLLVKNGEPLSYGVTFSEASLGSL 121


>ref|XP_003547745.1| PREDICTED: uncharacterized protein LOC100784641 [Glycine max]
          Length = 399

 Score =  137 bits (345), Expect = 9e-31
 Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 19/144 (13%)
 Frame = +3

Query: 99  PSKQLSPTQTSSPMAPKPSKQNIPELRNVKH------------------EVLLRIPGCKV 224
           P K+    +T + M    SK   P L N  H                  EV+L+IPGCKV
Sbjct: 9   PKKEQGKNRTETEMGCNSSKAEPPPLENTMHHHHHADVAEFQKPKTLKEEVVLQIPGCKV 68

Query: 225 HLIDEGEALELSNGDFTLFCISEDNVSIATTIKVGDDLQWPLTKDEPVVKLDAFHYLFSL 404
           HL+D+GEALEL+ G FT+  I E NV++AT IKVG+ +QWPLTKDEPVVK+DA HYLFSL
Sbjct: 69  HLMDQGEALELAQGHFTIMKIMEQNVALATIIKVGNSVQWPLTKDEPVVKVDALHYLFSL 128

Query: 405 PMK-GRTSLSYGVTFSQQNSGSLQ 473
           P+K G   LSYGVTF +Q  G+++
Sbjct: 129 PVKDGGEPLSYGVTFPEQCYGNME 152


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