BLASTX nr result

ID: Bupleurum21_contig00035947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035947
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]           98   6e-19
emb|CAB91581.1| putative protein [Arabidopsis thaliana]                91   8e-17
gb|AAG51081.1|AC027032_1 hypothetical protein [Arabidopsis thali...    89   3e-16
gb|AAD15468.1| putative helicase [Arabidopsis thaliana]                89   4e-16
gb|EKC99161.1| transcriptional factor B3 [Trichosporon asahii va...    88   6e-16

>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
          Length = 1428

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 43/71 (60%), Positives = 56/71 (78%)
 Frame = -1

Query: 254 DCMAVCRRFGSPDLFITFTCNPQWPEIKKFCDMIPQTDPTNRPDILARVFKIKLDLLLAD 75
           D MA+C+ FG PDLFITFTCNP+WPEI ++C+    T   +RPDI+AR+FKIKLD L+ D
Sbjct: 374 DAMAICKHFGFPDLFITFTCNPKWPEITRYCEKRGLT-ADDRPDIVARIFKIKLDSLMKD 432

Query: 74  LTDNHVLGKVI 42
           LT+ H+LGK +
Sbjct: 433 LTERHLLGKTV 443


>emb|CAB91581.1| putative protein [Arabidopsis thaliana]
          Length = 1752

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 41/71 (57%), Positives = 52/71 (73%)
 Frame = -1

Query: 254 DCMAVCRRFGSPDLFITFTCNPQWPEIKKFCDMIPQTDPTNRPDILARVFKIKLDLLLAD 75
           D MA+C+ +G PDLFITFTCNP+WPEI + C         +RPDI+AR+FKIKLD L+ D
Sbjct: 706 DAMAICKHYGFPDLFITFTCNPKWPEITRHC-QARGLSVDDRPDIVARIFKIKLDSLMKD 764

Query: 74  LTDNHVLGKVI 42
           LTD  +LGK +
Sbjct: 765 LTDGKMLGKTV 775


>gb|AAG51081.1|AC027032_1 hypothetical protein [Arabidopsis thaliana]
          Length = 1678

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/71 (56%), Positives = 54/71 (76%)
 Frame = -1

Query: 254 DCMAVCRRFGSPDLFITFTCNPQWPEIKKFCDMIPQTDPTNRPDILARVFKIKLDLLLAD 75
           D MA+C+ +G PDLFITFTCNP+WPEI ++ D     +P +RP+I+AR+FKIKLD L+ D
Sbjct: 716 DAMAICKHYGFPDLFITFTCNPKWPEITRYYDK-RGLNPEDRPNIIARIFKIKLDSLMND 774

Query: 74  LTDNHVLGKVI 42
           LT   +LGK +
Sbjct: 775 LTVKKMLGKTV 785


>gb|AAD15468.1| putative helicase [Arabidopsis thaliana]
          Length = 1265

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/71 (56%), Positives = 53/71 (74%)
 Frame = -1

Query: 254 DCMAVCRRFGSPDLFITFTCNPQWPEIKKFCDMIPQTDPTNRPDILARVFKIKLDLLLAD 75
           D MA+C+ +G PDLFITFTCNP+WP I ++CD     +P +R DI+AR+FKIKLD L+ D
Sbjct: 375 DAMAICKLYGFPDLFITFTCNPKWPHITRYCDK-RGLNPKDRLDIIARIFKIKLDSLMND 433

Query: 74  LTDNHVLGKVI 42
           LT   +LGK +
Sbjct: 434 LTVKKMLGKTV 444


>gb|EKC99161.1| transcriptional factor B3 [Trichosporon asahii var. asahii CBS
           8904]
          Length = 1876

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/73 (57%), Positives = 54/73 (73%)
 Frame = -1

Query: 254 DCMAVCRRFGSPDLFITFTCNPQWPEIKKFCDMIPQTDPTNRPDILARVFKIKLDLLLAD 75
           DCMA+ R  G+P LFITFTCN +W EI++  +++P+     RPD++ARVF +KL  LL D
Sbjct: 543 DCMAIVRALGNPTLFITFTCNSKWQEIQE--NLLPEQSADARPDLVARVFYLKLKQLLED 600

Query: 74  LTDNHVLGKVIGG 36
           L DN VLGKVIGG
Sbjct: 601 LWDNEVLGKVIGG 613


Top