BLASTX nr result

ID: Bupleurum21_contig00035906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035906
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517025.1| pentatricopeptide repeat-containing protein,...    67   2e-09
ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
emb|CBI26355.3| unnamed protein product [Vitis vinifera]               65   4e-09

>ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543660|gb|EEF45188.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 640

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +2

Query: 86  GSVNSSDPVLNKILRFYCRFAETHYAQKVFDGVPEPNSFMWTSMIHG 226
           GS+ SSD  LNK+LR Y +F    YA K+FD  PEPNSF+WT++IHG
Sbjct: 30  GSIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHG 76


>ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 642

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +2

Query: 83  EGSVNSSDPVLNKILRFYCRFAETHYAQKVFDGVPEPNSFMWTSMIHG 226
           E SV SS+ V+NK+LR Y RF  T YA KVFD + +PN+++WTS+IHG
Sbjct: 28  ESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHG 75


>emb|CBI26355.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +2

Query: 83  EGSVNSSDPVLNKILRFYCRFAETHYAQKVFDGVPEPNSFMWTSMIHG 226
           E SV SS+ V+NK+LR Y RF  T YA KVFD + +PN+++WTS+IHG
Sbjct: 28  ESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHG 75


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