BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035841
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]         132   3e-29
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  122   2e-26
gb|ABB46561.1| retrotransposon protein, putative, Ty1-copia subc...   122   3e-26
gb|ABF95221.1| retrotransposon protein, putative, unclassified [...   122   3e-26
gb|AAM08642.1|AC108883_15 Putative copia-type pol polyprotein [O...   122   3e-26

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = -2

Query: 251 DFGGCKIDRKSTSGSCQFLGGKLVSWFSKKQHSVSTSTAEAEYIAVGSCCAQVLWIKNQL 72
           ++ GCK+DRKST+GSCQ LGGKLVSW SKKQHSVSTSTAEAEY+A GSCCAQVLW+KNQL
Sbjct: 252 NYAGCKVDRKSTTGSCQLLGGKLVSWTSKKQHSVSTSTAEAEYVAAGSCCAQVLWMKNQL 311

Query: 71  IDYGFHLKKISILCDNTSAISI 6
            DY     +I I CDN+SAI+I
Sbjct: 312 ADYDQVFTEIPIFCDNSSAIAI 333


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/82 (67%), Positives = 68/82 (82%)
 Frame = -2

Query: 251  DFGGCKIDRKSTSGSCQFLGGKLVSWFSKKQHSVSTSTAEAEYIAVGSCCAQVLWIKNQL 72
            D+ GCKI+RKSTSG+CQFLG  LVSW SKKQ+SV+ STAEAEYIA G CCAQ+LW++  L
Sbjct: 912  DWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTL 971

Query: 71   IDYGFHLKKISILCDNTSAISI 6
            +DYG+ L K+ +LCDN SAI +
Sbjct: 972  LDYGYKLTKVPLLCDNESAIKM 993


>gb|ABB46561.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1991

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/82 (67%), Positives = 66/82 (80%)
 Frame = -2

Query: 251  DFGGCKIDRKSTSGSCQFLGGKLVSWFSKKQHSVSTSTAEAEYIAVGSCCAQVLWIKNQL 72
            D+ GCK+DRKSTSG+CQFLG  LVSW SKKQ+SV  ST EAEY++ GSCCAQ+LW+K  L
Sbjct: 1351 DYAGCKVDRKSTSGTCQFLGRSLVSWSSKKQNSVVLSTTEAEYVSAGSCCAQLLWMKQTL 1410

Query: 71   IDYGFHLKKISILCDNTSAISI 6
             DYG ++ KI +LCDN SAI I
Sbjct: 1411 RDYGLNVSKIPLLCDNESAIKI 1432


>gb|ABF95221.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2111

 Score =  122 bits (306), Expect = 3e-26
 Identities = 53/82 (64%), Positives = 68/82 (82%)
 Frame = -2

Query: 251  DFGGCKIDRKSTSGSCQFLGGKLVSWFSKKQHSVSTSTAEAEYIAVGSCCAQVLWIKNQL 72
            D+ GCK+DRKST+G+CQFLG  LVSW SKKQ+S++ STAEAEY+A GSCCAQ+LW++  L
Sbjct: 1417 DYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGSCCAQLLWMRQTL 1476

Query: 71   IDYGFHLKKISILCDNTSAISI 6
             D+G++  KI +LCDN SAI I
Sbjct: 1477 KDFGYNFTKIPLLCDNESAIKI 1498


>gb|AAM08642.1|AC108883_15 Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
          Length = 1866

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/82 (67%), Positives = 66/82 (80%)
 Frame = -2

Query: 251  DFGGCKIDRKSTSGSCQFLGGKLVSWFSKKQHSVSTSTAEAEYIAVGSCCAQVLWIKNQL 72
            D+ GCK+DRKSTSG+CQFLG  LVSW SKKQ+SV  ST EAEY++ GSCCAQ+LW+K  L
Sbjct: 1226 DYAGCKVDRKSTSGTCQFLGRSLVSWSSKKQNSVVLSTTEAEYVSAGSCCAQLLWMKQTL 1285

Query: 71   IDYGFHLKKISILCDNTSAISI 6
             DYG ++ KI +LCDN SAI I
Sbjct: 1286 RDYGLNVSKIPLLCDNESAIKI 1307