BLASTX nr result
ID: Bupleurum21_contig00035840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00035840
(305 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat... 134 6e-30
ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat... 132 2e-29
ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat... 132 3e-29
ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago ... 130 1e-28
ref|NP_186807.2| pentatricopeptide repeat-containing protein [Ar... 110 2e-22
>ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 134 bits (338), Expect = 6e-30
Identities = 62/101 (61%), Positives = 79/101 (78%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H+LA+ G ELDI VSTALMDMY+ C+SP+ A+ELF RMP+KD V+W+ L SG +
Sbjct: 330 HKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMA 389
Query: 181 HKSMTIFCDMLSSGVQPDGIAMVKILTACSELGIIQQTLCL 303
HKS+ +FC+MLS+G +PD IA+VKIL A SELGI+QQ LCL
Sbjct: 390 HKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCL 430
Score = 57.4 bits (137), Expect = 1e-06
Identities = 26/89 (29%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +1
Query: 13 IQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRTHKSM 192
++K ++ D+ V +AL+++Y C ++AV++F P+ D V W+++++G QN ++
Sbjct: 131 LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELAL 190
Query: 193 TIFCDMLS-SGVQPDGIAMVKILTACSEL 276
F M+ V PD + +V +AC++L
Sbjct: 191 AFFSRMVVLEQVSPDPVTLVSAASACAQL 219
>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 132 bits (333), Expect = 2e-29
Identities = 64/101 (63%), Positives = 78/101 (77%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H++A+ KG ELD VSTAL+DMYM C PDEAV+LF R+P+KD V+W ALLSG QN
Sbjct: 330 HKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMA 389
Query: 181 HKSMTIFCDMLSSGVQPDGIAMVKILTACSELGIIQQTLCL 303
+KSM +F +MLS G+QPD +A+VKIL A SELGI QQ LCL
Sbjct: 390 YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCL 430
Score = 75.5 bits (184), Expect = 4e-12
Identities = 38/97 (39%), Positives = 57/97 (58%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H IQ G E DILV+TA+MDMY C S D A LF KD V WSA+++ +
Sbjct: 942 HSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHG 1001
Query: 181 HKSMTIFCDMLSSGVQPDGIAMVKILTACSELGIIQQ 291
K++ +F M+ +GV+P + +L+ACS G++++
Sbjct: 1002 RKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEE 1038
Score = 64.3 bits (155), Expect = 1e-08
Identities = 32/97 (32%), Positives = 56/97 (57%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
HQ + G D+ V AL+DMY C + A +F +M +D V+W++++SG N
Sbjct: 841 HQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYN 900
Query: 181 HKSMTIFCDMLSSGVQPDGIAMVKILTACSELGIIQQ 291
+++ F M SSGV P+ ++++ +L AC LG +++
Sbjct: 901 SETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRK 937
Score = 61.6 bits (148), Expect = 6e-08
Identities = 30/100 (30%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H ++ G ++ V +L+++Y C S +AV+LF M +D V WS++++ + R
Sbjct: 431 HGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRG 490
Query: 181 HKSMTIFCDML-SSGVQPDGIAMVKILTACSELGIIQQTL 297
+++ IF M+ +S V+P+ + + IL+ACS G++++ L
Sbjct: 491 GEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGL 530
Score = 57.8 bits (138), Expect = 9e-07
Identities = 24/90 (26%), Positives = 52/90 (57%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H L I++ + D+ + +L+++Y A LF +MPEKD ++WS +++ N+
Sbjct: 229 HGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAA 288
Query: 181 HKSMTIFCDMLSSGVQPDGIAMVKILTACS 270
++++ +F +M+ +P+ + +V L AC+
Sbjct: 289 NEALNLFHEMIEKRFEPNSVTVVSALQACA 318
>ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 132 bits (332), Expect = 3e-29
Identities = 62/101 (61%), Positives = 77/101 (76%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H+LA+ G ELDI VSTALMDMYM C+SP A++LF RMP+KD V+W+ L SG +
Sbjct: 331 HKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMA 390
Query: 181 HKSMTIFCDMLSSGVQPDGIAMVKILTACSELGIIQQTLCL 303
HKS+ +FC+MLS G +PD IA+VKIL A SELGI+QQ LCL
Sbjct: 391 HKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCL 431
Score = 57.8 bits (138), Expect = 9e-07
Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H +K ++ D+ V +AL+++Y C ++AV++F P++D V W+++++G QN
Sbjct: 128 HGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSP 187
Query: 181 HKSMTIFCDMLS-SGVQPDGIAMVKILTACSEL 276
++ F M+ V PD + +V +AC++L
Sbjct: 188 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQL 220
Score = 57.8 bits (138), Expect = 9e-07
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H + G + + + +L+++Y C S D A ++F M KD V WS++++ + +
Sbjct: 432 HAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQG 491
Query: 181 HKSMTIFCDMLS-SGVQPDGIAMVKILTACSELGIIQQ 291
+++ +F M + S V+P+ + V IL+ACS G+I++
Sbjct: 492 EEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEE 529
>ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein
MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 130 bits (326), Expect = 1e-28
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H+LA+ G E++ VSTALMDMYM C+SP++AV+LF RMP+KD +AW+ L SG N
Sbjct: 468 HELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMV 527
Query: 181 HKSMTIFCDMLSSGVQPDGIAMVKILTACSELGIIQQTLCL 303
H+SM +F +MLSSG +PD IA+VKILT SELGI+QQ +CL
Sbjct: 528 HESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCL 568
Score = 59.3 bits (142), Expect = 3e-07
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 34 DILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRTHKSMTIFCDM- 210
D+ V +AL+D+Y C ++AV++F P+ D V W++++SG Q+ ++ F M
Sbjct: 276 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 335
Query: 211 LSSGVQPDGIAMVKILTACSEL 276
+S V PD + +V + +AC++L
Sbjct: 336 VSEKVSPDPVTLVSVASACAQL 357
Score = 57.8 bits (138), Expect = 9e-07
Identities = 27/98 (27%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H I+ G E + + +L+++Y C S ++A ++F M KD V WS++++ + +
Sbjct: 569 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 628
Query: 181 HKSMTIFCDMLS-SGVQPDGIAMVKILTACSELGIIQQ 291
+++ +F M + S +P+ + + IL+ACS G+I++
Sbjct: 629 EEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKE 666
>ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At3g01580 gi|332640170|gb|AEE73691.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 660
Score = 110 bits (274), Expect = 2e-22
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H+LAI+KGLE ++ VSTAL+DMYM C+SP+EA +F R+P KD V+W AL+SG N
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 181 HKSMTIFCDM-LSSGVQPDGIAMVKILTACSELGIIQQTLC 300
H+S+ F M L + +PD I MVK+L +CSELG ++Q C
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKC 387
Score = 60.1 bits (144), Expect = 2e-07
Identities = 28/97 (28%), Positives = 55/97 (56%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H I++G D+ + +L++ Y + EAV LF + EKD ++WS +++ VQN
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 181 HKSMTIFCDMLSSGVQPDGIAMVKILTACSELGIIQQ 291
+++ +F DM+ G +P+ ++ +L AC+ ++Q
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Score = 56.6 bits (135), Expect = 2e-06
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 HQLAIQKGLELDILVSTALMDMYMNCYSPDEAVELFYRMPEKDEVAWSALLSGCVQNKRT 180
H I+ G + + + +L+++Y C S A ++F + KD V W++L++G + +
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Query: 181 HKSMTIFCDML-SSGVQPDGIAMVKILTACSELGIIQQTL 297
K++ F M+ SS V+P+ + + IL+ACS G+I + L
Sbjct: 449 TKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488