BLASTX nr result

ID: Bupleurum21_contig00035731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035731
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83217.1| hypothetical protein VITISV_018000 [Vitis vinife...    75   4e-12
ref|XP_002322512.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002533037.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
emb|CAN79989.1| hypothetical protein VITISV_021023 [Vitis vinifera]    60   2e-07
ref|XP_002531695.1| hypothetical protein RCOM_0483300 [Ricinus c...    59   5e-07

>emb|CAN83217.1| hypothetical protein VITISV_018000 [Vitis vinifera]
           gi|297737545|emb|CBI26746.3| unnamed protein product
           [Vitis vinifera]
          Length = 124

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/73 (56%), Positives = 50/73 (68%)
 Frame = +1

Query: 79  MGREISDQTVMHSSIALLQERFRQLQKVKAMREEKNMLKLFPDYADSCTSPPRYNSTHQQ 258
           MGR+ SD  V+HSSIALLQERFRQLQ+ K MREE+ +L+LF       +  P  N T   
Sbjct: 1   MGRQSSDPIVIHSSIALLQERFRQLQRAKEMREERELLRLF-------SQSPGVNPTEFP 53

Query: 259 KPSTLFFQSELLL 297
           +PS  FFQSEL+L
Sbjct: 54  EPSRSFFQSELIL 66


>ref|XP_002322512.1| predicted protein [Populus trichocarpa] gi|222867142|gb|EEF04273.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = +1

Query: 79  MGREISDQTVMHSSIALLQERFRQLQKVKAMREEKNMLKLFPDYADSCTSPPRYNSTHQQ 258
           MG E +D  V+ SSIALLQERFRQLQ+VKAMREEK + K+  +      SP + + + Q 
Sbjct: 1   MGNENNDPVVIQSSIALLQERFRQLQRVKAMREEKELSKVLVE------SPRQLSPSMQY 54

Query: 259 KP--STLFFQSELLL 297
           +P  S LFF  EL+L
Sbjct: 55  EPAASRLFFHPELIL 69


>ref|XP_002533037.1| conserved hypothetical protein [Ricinus communis]
           gi|223527175|gb|EEF29345.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = +1

Query: 79  MGREISDQTVMHSSIALLQERFRQLQKVKAMREEKNMLKLFPDYADSCTSPPRYNSTHQQ 258
           MGR+  D T +HSSIALLQERFRQL++ K MR+++ +L+LF +       PP+  +  Q 
Sbjct: 1   MGRQNCDPTSIHSSIALLQERFRQLERAKEMRQQRELLRLFSEAEQ--VKPPK--AFEQS 56

Query: 259 KPSTLFFQSELLL 297
           +P   FF SEL+L
Sbjct: 57  RP---FFHSELVL 66


>emb|CAN79989.1| hypothetical protein VITISV_021023 [Vitis vinifera]
          Length = 131

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +1

Query: 79  MGREISDQTVMHSSIALLQERFRQLQKVKAMREEKNMLKLFPD 207
           MGR+ SD T++ SSIALLQERFRQLQ+VK  REEK +LKLF +
Sbjct: 1   MGRQGSDPTMVSSSIALLQERFRQLQRVKERREEKELLKLFSE 43


>ref|XP_002531695.1| hypothetical protein RCOM_0483300 [Ricinus communis]
           gi|223528671|gb|EEF30686.1| hypothetical protein
           RCOM_0483300 [Ricinus communis]
          Length = 144

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
 Frame = +1

Query: 79  MGREISDQTVMHSSIALLQERFRQLQKVKAMREEKNMLKLFPDYAD-------SCTSPPR 237
           MGR+  D TV  SSIALLQERFR+LQ+++  R EK +LKLF   ++       SC+S   
Sbjct: 1   MGRQNGDATVASSSIALLQERFRELQRIREKRREKELLKLFSSESEKRKSNSSSCSSSSS 60

Query: 238 YNSTH---QQKPSTLFFQSELLL 297
            +        +P+ L FQ E++L
Sbjct: 61  SSGASAGMHFEPNKLTFQPEMIL 83


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