BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035652
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   284   2e-74
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   284   2e-74
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        278   1e-72
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   275   1e-71
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...   273   5e-71

>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  284 bits (727), Expect = 2e-74
 Identities = 144/307 (46%), Positives = 211/307 (68%), Gaps = 10/307 (3%)
 Frame = -1

Query: 891  REQRAEANLTKINDDEPALLVAELK---------HDTNITDGRMMLHNTGTFKATTSIGR 739
            ++++ EA+L + +D  PALL+A  +         H+  +   +++L ++G   A T    
Sbjct: 306  KKKKVEAHLAQTDDANPALLLAVTEDEPASGLVVHEERVWP-QLLLADSG---AATG--- 358

Query: 738  EIESKNEENIWYLDNGASNHMTGHREKFTKLNESVAGQVKFGDDSVVHIRGRGSIKLLCK 559
                    +IW+LDNGASNHMTG R KF  L+ S+ G VKFGD S V I+G+GSI   CK
Sbjct: 359  --------DIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCK 410

Query: 558  NGEERELKDVFFIPTMRSNIISLGQLSEEGNRVVLDGDQLWVYDICG-KLLMRVRRSSNR 382
            NG++  L+DVF+IP++  N++SLGQL+E G+RVV+D D L V+D    +L+MRVRR+ NR
Sbjct: 411  NGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNR 470

Query: 381  LYKLSIQENRGTCLLTKSEETSRLWHLRLGHVNYQAMQEMSKHHMVNGMPVLSQPKGLCD 202
            LY++ ++     CLLT+ +E + LWH RLGHVN+QAM+ ++   M  G+P ++ P  LC 
Sbjct: 471  LYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQ 530

Query: 201  GCLLSKQIRKPFPTQSNFSTKTPLALIHGDLCGPISPPTPAGNKYFMLLVDDFTRMMWVY 22
             CL++KQIR+PFP  +NF  + PL L+H DLCGPI+P T AGN+YFML+VDDF+R MW++
Sbjct: 531  ACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMF 590

Query: 21   MLKSKDE 1
            ++K+KD+
Sbjct: 591  VIKTKDQ 597


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  284 bits (727), Expect = 2e-74
 Identities = 144/307 (46%), Positives = 211/307 (68%), Gaps = 10/307 (3%)
 Frame = -1

Query: 891  REQRAEANLTKINDDEPALLVAELK---------HDTNITDGRMMLHNTGTFKATTSIGR 739
            ++++ EA+L + +D  PALL+A  +         H+  +   +++L ++G   A T    
Sbjct: 306  KKKKVEAHLAQTDDANPALLLAVTEDEPASGLVVHEERVWP-QLLLADSG---AATG--- 358

Query: 738  EIESKNEENIWYLDNGASNHMTGHREKFTKLNESVAGQVKFGDDSVVHIRGRGSIKLLCK 559
                    +IW+LDNGASNHMTG R KF  L+ S+ G VKFGD S V I+G+GSI   CK
Sbjct: 359  --------DIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCK 410

Query: 558  NGEERELKDVFFIPTMRSNIISLGQLSEEGNRVVLDGDQLWVYDICG-KLLMRVRRSSNR 382
            NG++  L+DVF+IP++  N++SLGQL+E G+RVV+D D L V+D    +L+MRVRR+ NR
Sbjct: 411  NGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNR 470

Query: 381  LYKLSIQENRGTCLLTKSEETSRLWHLRLGHVNYQAMQEMSKHHMVNGMPVLSQPKGLCD 202
            LY++ ++     CLLT+ +E + LWH RLGHVN+QAM+ ++   M  G+P ++ P  LC 
Sbjct: 471  LYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQ 530

Query: 201  GCLLSKQIRKPFPTQSNFSTKTPLALIHGDLCGPISPPTPAGNKYFMLLVDDFTRMMWVY 22
             CL++KQIR+PFP  +NF  + PL L+H DLCGPI+P T AGN+YFML+VDDF+R MW++
Sbjct: 531  ACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMF 590

Query: 21   MLKSKDE 1
            ++K+KD+
Sbjct: 591  VIKTKDQ 597


>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  278 bits (711), Expect = 1e-72
 Identities = 140/302 (46%), Positives = 206/302 (68%), Gaps = 5/302 (1%)
 Frame = -1

Query: 891  REQRAEANLTKINDDEPALLVA--ELKHDTNITDGR--MMLHNTGTFKATTSIGREIESK 724
            ++++AEA+L +  D  PALL+A  E   +    D    +++H    +       +   + 
Sbjct: 112  KKKKAEAHLAQTEDAGPALLLAVTEAVQNAPCQDALCGLVVHEERVWPRLMLAEKGAAAG 171

Query: 723  NEENIWYLDNGASNHMTGHREKFTKLNESVAGQVKFGDDSVVHIRGRGSIKLLCKNGEER 544
            +   +WYLDNGASNHM+G R KF +L+E+V GQV+FGD S V I G+GSI   CKNG++ 
Sbjct: 172  D---LWYLDNGASNHMSGDRRKFRELDETVTGQVRFGDASSVQIMGQGSILFSCKNGDQW 228

Query: 543  ELKDVFFIPTMRSNIISLGQLSEEGNRVVLDGDQLWVYDICG-KLLMRVRRSSNRLYKLS 367
             L DV++IP++  N++SLGQL+E G+RVV+DGD L V+D    +L+M+VRR+SNRLY++ 
Sbjct: 229  LLDDVYYIPSLCCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRTSNRLYRIE 288

Query: 366  IQENRGTCLLTKSEETSRLWHLRLGHVNYQAMQEMSKHHMVNGMPVLSQPKGLCDGCLLS 187
            +Q     CLL   ++ + LWH RLGHVN+ A++ +    MV G+P +  P  LC  CL++
Sbjct: 289  LQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMVAGVPAVHHPNQLCQACLVA 348

Query: 186  KQIRKPFPTQSNFSTKTPLALIHGDLCGPISPPTPAGNKYFMLLVDDFTRMMWVYMLKSK 7
            KQ+R+ FP  +N+  + PL L+H DLCGPI+P T AGN+YFML+VDDF+R MWV+++KSK
Sbjct: 349  KQVRQSFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLIVDDFSRWMWVFVIKSK 408

Query: 6    DE 1
            D+
Sbjct: 409  DQ 410


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108710383|gb|ABF98178.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  275 bits (702), Expect = 1e-71
 Identities = 137/302 (45%), Positives = 203/302 (67%), Gaps = 5/302 (1%)
 Frame = -1

Query: 891  REQRAEANLTKINDDEPALLVA--ELKHDTNITDGR--MMLHNTGTFKATTSIGREIESK 724
            ++++AEA+L +  D  P LL+A  E   + +  D    +++H    +       +   + 
Sbjct: 252  KKKKAEAHLAQTEDAGPTLLLAVTEAVQNASRQDALCGLVVHEERVWPRLMLAEKGAAAG 311

Query: 723  NEENIWYLDNGASNHMTGHREKFTKLNESVAGQVKFGDDSVVHIRGRGSIKLLCKNGEER 544
            +   +WYLDNGASNHM+G   KF +L+E+V GQV+FGD S V I G+GSI   CKNG++ 
Sbjct: 312  D---LWYLDNGASNHMSGDHRKFRELDETVTGQVRFGDASSVQIMGKGSILFSCKNGDQW 368

Query: 543  ELKDVFFIPTMRSNIISLGQLSEEGNRVVLDGDQLWVYDICG-KLLMRVRRSSNRLYKLS 367
             L DV++IP++  N++SLGQL+E G+RVV+DGD L V+D    +L+M+VRRSSNRLY++ 
Sbjct: 369  LLDDVYYIPSLYCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRSSNRLYRIE 428

Query: 366  IQENRGTCLLTKSEETSRLWHLRLGHVNYQAMQEMSKHHMVNGMPVLSQPKGLCDGCLLS 187
            +Q     CLL   ++ + LWH RLGHVN+ A++ +    M  G+P +  P  LC  CL++
Sbjct: 429  LQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMAAGVPAVHHPNQLCQACLVA 488

Query: 186  KQIRKPFPTQSNFSTKTPLALIHGDLCGPISPPTPAGNKYFMLLVDDFTRMMWVYMLKSK 7
            KQ+R+PFP  +N+  + PL L+H DLCGPI+P T  GN+YFML+VDDF+  MWV+++KSK
Sbjct: 489  KQVRQPFPGMANYLAEAPLELLHMDLCGPITPSTFTGNRYFMLIVDDFSHWMWVFVIKSK 548

Query: 6    DE 1
            D+
Sbjct: 549  DQ 550


>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score =  273 bits (697), Expect = 5e-71
 Identities = 137/302 (45%), Positives = 203/302 (67%), Gaps = 5/302 (1%)
 Frame = -1

Query: 891  REQRAEANLTKINDDEPALLVAELKHDTNIT----DGRMMLHNTGTFKATTSIGREIESK 724
            ++++AEA+L + +D  PALL+A  K   N      D  +++H    +       +   + 
Sbjct: 292  KKKKAEAHLVQTDDAGPALLLAVTKAVQNAPGQGMDCGLVVHEERVWPRLMLAEKGAAAG 351

Query: 723  NEENIWYLDNGASNHMTGHREKFTKLNESVAGQVKFGDDSVVHIRGRGSIKLLCKNGEER 544
            +   +WYLDNGASNHMTG R KF +L+E+V G V+FGD S V I G+G I   CKNG++ 
Sbjct: 352  D---LWYLDNGASNHMTGDRRKFRELDETVTGVVRFGDASSVQIMGKGLILFACKNGDQW 408

Query: 543  ELKDVFFIPTMRSNIISLGQLSEEGNRVVLDGDQLWVYDICG-KLLMRVRRSSNRLYKLS 367
             L DV++IP++  N++SLGQL+E G+RVV+D D L V+D    +L+++VRR+SNRLY++ 
Sbjct: 409  LLDDVYYIPSLCCNMVSLGQLTETGHRVVMDNDDLEVFDKNPWRLVIKVRRTSNRLYRIE 468

Query: 366  IQENRGTCLLTKSEETSRLWHLRLGHVNYQAMQEMSKHHMVNGMPVLSQPKGLCDGCLLS 187
            +Q     CLLT   + + LWH RLGHVN+Q ++ +    M  G+P +  P  LC  CL++
Sbjct: 469  LQLASPVCLLTSLGDPAWLWHARLGHVNFQTLKLLVDKEMAAGVPQVHHPNQLCQACLMA 528

Query: 186  KQIRKPFPTQSNFSTKTPLALIHGDLCGPISPPTPAGNKYFMLLVDDFTRMMWVYMLKSK 7
            KQIR+PFP  +N+  + PL L+H DLCGPI+P T A N+YF+L+VDDF+R MWV+++K+K
Sbjct: 529  KQIRQPFPAMANYRAEAPLELLHMDLCGPITPSTFAVNRYFLLIVDDFSRWMWVFVIKTK 588

Query: 6    DE 1
            D+
Sbjct: 589  DQ 590