BLASTX nr result

ID: Bupleurum21_contig00035642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035642
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...   101   6e-20
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote...    96   3e-18
emb|CBI24843.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arab...    84   9e-15
ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arab...    84   1e-14

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/90 (57%), Positives = 64/90 (71%)
 Frame = +3

Query: 48  GTSEFEDLSARTRAVAHFLKERSSVTPVVQNQSGNISLKTILEGKRRKLCARMIYEILVL 227
           GT +   LS RTRAVA +L+  S + P+ ++ S  +SL  ILEGK RK+ ARM +E LVL
Sbjct: 672 GTQDVSTLSIRTRAVAQYLQNHSPINPISEDPSMELSLNKILEGKTRKIAARMFFETLVL 731

Query: 228 KNRGLVDVIQEESYGDITLTVTPKLSEELF 317
           KN GLVDV QEE YGDITL +TPKLS+  F
Sbjct: 732 KNYGLVDVQQEEPYGDITLKMTPKLSKARF 761


>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
            sativus]
          Length = 908

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/86 (55%), Positives = 61/86 (70%)
 Frame = +3

Query: 48   GTSEFEDLSARTRAVAHFLKERSSVTPVVQNQSGNISLKTILEGKRRKLCARMIYEILVL 227
            GT   + LS RTRA+  +L+  S +  +  N + ++SL  ILEGKRRKLCARM YE LVL
Sbjct: 819  GTRGVDSLSVRTRALGRYLRSLSPIKSISDNSNQDLSLNGILEGKRRKLCARMFYETLVL 878

Query: 228  KNRGLVDVIQEESYGDITLTVTPKLS 305
            K+ GL+DV Q+  YGDITL +TPKLS
Sbjct: 879  KSYGLIDVQQDVPYGDITLKLTPKLS 904


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/77 (58%), Positives = 56/77 (72%)
 Frame = +3

Query: 87  AVAHFLKERSSVTPVVQNQSGNISLKTILEGKRRKLCARMIYEILVLKNRGLVDVIQEES 266
           AVA +L+  S + P+ ++ S  +SL  ILEGK RK+ ARM +E LVLKN GLVDV QEE 
Sbjct: 633 AVAQYLQNHSPINPISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEP 692

Query: 267 YGDITLTVTPKLSEELF 317
           YGDITL +TPKLS+  F
Sbjct: 693 YGDITLKMTPKLSKARF 709


>ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arabidopsis lyrata subsp.
           lyrata] gi|297322348|gb|EFH52769.1| hypothetical protein
           ARALYDRAFT_486422 [Arabidopsis lyrata subsp. lyrata]
          Length = 696

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/84 (48%), Positives = 59/84 (70%)
 Frame = +3

Query: 51  TSEFEDLSARTRAVAHFLKERSSVTPVVQNQSGNISLKTILEGKRRKLCARMIYEILVLK 230
           + + + L+ R RA+A +L++RSS +P   + SG++SL  IL GK RKL ARM +E LVLK
Sbjct: 607 SQDSDALTGRARALAQYLRQRSSSSPTSSHPSGDLSLSEILAGKTRKLAARMFFETLVLK 666

Query: 231 NRGLVDVIQEESYGDITLTVTPKL 302
           +RGL+D+ Q+  YGDI L + P L
Sbjct: 667 SRGLIDMQQDRPYGDIALKLMPAL 690


>ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arabidopsis lyrata subsp.
           lyrata] gi|297318587|gb|EFH49009.1| hypothetical protein
           ARALYDRAFT_911799 [Arabidopsis lyrata subsp. lyrata]
          Length = 653

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/88 (50%), Positives = 58/88 (65%)
 Frame = +3

Query: 39  RHLGTSEFEDLSARTRAVAHFLKERSSVTPVVQNQSGNISLKTILEGKRRKLCARMIYEI 218
           R   T   + L  RTR VA +LKER S +    + SG++SL  ILEGK RK+ ARM YE 
Sbjct: 560 RSPATQYSDALPGRTRTVAQYLKERCSSSLTSSHASGDLSLNKILEGKTRKIAARMFYET 619

Query: 219 LVLKNRGLVDVIQEESYGDITLTVTPKL 302
           LVLK+RGL+D+ Q++ Y DI+L + P L
Sbjct: 620 LVLKSRGLIDMKQDQPYSDISLKLMPAL 647


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