BLASTX nr result

ID: Bupleurum21_contig00035595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035595
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    84   9e-15
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    79   4e-13
ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 ...    72   6e-11
ref|XP_002454313.1| hypothetical protein SORBIDRAFT_04g028482 [S...    70   2e-10
ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10

>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/93 (40%), Positives = 56/93 (60%)
 Frame = -1

Query: 279 KKPNVVFLCEILCXXXXXXXXKNLLGFEGSITVETQGHSGGIAIIWRNKEEVDLMSFSKN 100
           KKP V+FL E  C         N L +EGS  V  +GHS G+ +IWR K++V ++     
Sbjct: 368 KKPEVIFLIETFCTSARISEIANKLNYEGSYGVNCRGHSAGLGLIWRCKDKVTILGSHDR 427

Query: 99  HIDVLVKIEDWQQFRLTGVYGEPDRNRRRETWE 1
           +ID +V +E+ + FRLTG YG  +R++R  +WE
Sbjct: 428 YIDAIVTLENQRMFRLTGFYGLANRSQRSSSWE 460


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/92 (41%), Positives = 56/92 (60%)
 Frame = -1

Query: 279 KKPNVVFLCEILCXXXXXXXXKNLLGFEGSITVETQGHSGGIAIIWRNKEEVDLMSFSKN 100
           +KP+ +FL E L         K+ LGFEG+  V+  G  GG+A +WR      L+ +S++
Sbjct: 333 RKPDFIFLIETLVHSAQVEKLKSKLGFEGAFCVDRVGRGGGLAFLWRKAGMFSLLXYSQS 392

Query: 99  HIDVLVKIEDWQQFRLTGVYGEPDRNRRRETW 4
           HID+ V  ED  Q+R+TG YG PDR++R  +W
Sbjct: 393 HIDMEVSEEDGLQWRVTGFYGFPDRSQRHLSW 424


>ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor]
           gi|241947006|gb|EES20151.1| hypothetical protein
           SORBIDRAFT_0011s003210 [Sorghum bicolor]
          Length = 821

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
 Frame = -1

Query: 279 KKPNVVFLCEILCXXXXXXXXKNLLGFEGSITVETQGHSGGIAIIWRNKEEVDLMSFSKN 100
           KKP VVFL E              LGF+ +I V+++G SGG+ ++W     V  ++ S++
Sbjct: 102 KKPAVVFLMETRMGEEKALGLARRLGFQNAIVVKSEGLSGGLMLMWHGNVMVAELTKSRS 161

Query: 99  HIDVL-----VKIEDWQQFRLTGVYGEPDRNRRRETW 4
           HIDV+     +KI  W   RLTG YGEP   RRRE+W
Sbjct: 162 HIDVILSCDHLKISHW---RLTGFYGEPRWERRRESW 195


>ref|XP_002454313.1| hypothetical protein SORBIDRAFT_04g028482 [Sorghum bicolor]
           gi|241934144|gb|EES07289.1| hypothetical protein
           SORBIDRAFT_04g028482 [Sorghum bicolor]
          Length = 509

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/91 (32%), Positives = 51/91 (56%)
 Frame = -1

Query: 273 PNVVFLCEILCXXXXXXXXKNLLGFEGSITVETQGHSGGIAIIWRNKEEVDLMSFSKNHI 94
           P V+F+ E           +  LG++ S  V + G SGG+ + W+N   V +  FSK HI
Sbjct: 225 PAVIFIMETQINKYRVENLRYSLGYDDSFAVNSSGKSGGLGLFWKNDVNVSIKKFSKYHI 284

Query: 93  DVLVKIEDWQQFRLTGVYGEPDRNRRRETWE 1
           D +++    + +R++ +YGEP+R+ R  TW+
Sbjct: 285 DTIIEENGKEPWRMSFIYGEPNRSLRHRTWD 315


>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/68 (45%), Positives = 43/68 (63%)
 Frame = -1

Query: 207 LGFEGSITVETQGHSGGIAIIWRNKEEVDLMSFSKNHIDVLVKIEDWQQFRLTGVYGEPD 28
           LG  G   V+  G  GG+A++WR+   V L+ +S NHID+LV   +   +R TG YG PD
Sbjct: 36  LGNNGFFAVDRLGRGGGLAVLWRSSASVSLLGYSNNHIDLLVVEANNFIWRFTGYYGLPD 95

Query: 27  RNRRRETW 4
           RNR+ E+W
Sbjct: 96  RNRKMESW 103


Top