BLASTX nr result

ID: Bupleurum21_contig00035499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035499
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19955.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
gb|AER41645.1| CRR4 [Oryza punctata]                                   76   3e-12
gb|AER41563.1| CRR4 [Oryza australiensis]                              75   7e-12
dbj|BAC10060.1| selenium-binding protein-like protein [Oryza sat...    72   5e-11

>emb|CBI19955.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/70 (58%), Positives = 51/70 (72%)
 Frame = +3

Query: 12  RWEDVMRMRMAMKLQGIEKIPGCSLIQVGDRVHEFLAKETNHEHRKEIYQALDSLIGHSR 191
           RWEDV+  R+AM+ Q +EK+PGCS IQVG+RVHEFLAK+T H  RKEIY+AL  L G  +
Sbjct: 418 RWEDVLSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRALVCLNGQLK 477

Query: 192 VSSHIC*KIS 221
           V      +IS
Sbjct: 478 VECDCAIRIS 487


>ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 658

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = +3

Query: 12  RWEDVMRMRMAMKLQGIEKIPGCSLIQVGDRVHEFLAKETNHEHRKEIYQAL 167
           RWEDV+  R+AM+ Q +EK+PGCS IQVG+RVHEFLAK+T H  RKEIY+AL
Sbjct: 519 RWEDVLSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRAL 570


>gb|AER41645.1| CRR4 [Oryza punctata]
          Length = 632

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/60 (58%), Positives = 44/60 (73%)
 Frame = +3

Query: 12  RWEDVMRMRMAMKLQGIEKIPGCSLIQVGDRVHEFLAKETNHEHRKEIYQALDSLIGHSR 191
           RW+ V+  R +M+  GIEK+PG SLIQVG  VHEFLAK+T HE RKEIY+ +D L+   R
Sbjct: 559 RWDGVIGARTSMRNWGIEKVPGSSLIQVGSEVHEFLAKDTRHERRKEIYETVDGLMALMR 618


>gb|AER41563.1| CRR4 [Oryza australiensis]
          Length = 599

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/60 (56%), Positives = 44/60 (73%)
 Frame = +3

Query: 12  RWEDVMRMRMAMKLQGIEKIPGCSLIQVGDRVHEFLAKETNHEHRKEIYQALDSLIGHSR 191
           RW+ V+  R +M+  GIEK+PG SLIQVG  VHEFLAK+T HE +KEIY+ +D L+   R
Sbjct: 521 RWDGVIGARTSMRNWGIEKVPGSSLIQVGSEVHEFLAKDTRHERKKEIYETVDGLMALMR 580


>dbj|BAC10060.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
          Length = 631

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = +3

Query: 12  RWEDVMRMRMAMKLQGIEKIPGCSLIQVGDRVHEFLAKETNHEHRKEIYQALDSLIGHSR 191
           RW+ V+  R +M+  GIEK+PG S IQVG  VHEFLAK+T H+ RKEIY+ +D L+   R
Sbjct: 560 RWDGVIDARTSMRNWGIEKVPGSSSIQVGSEVHEFLAKDTRHKRRKEIYETVDGLMALMR 619


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