BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035494
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   434   e-119
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...   422   e-116
gb|ACB28472.1| polyprotein [Ananas comosus]                           393   e-107
emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                387   e-105
emb|CAJ00277.1| hypothetical protein [Lotus japonicus]                387   e-105

>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  434 bits (1116), Expect = e-119
 Identities = 224/376 (59%), Positives = 268/376 (71%), Gaps = 1/376 (0%)
 Frame = -3

Query: 1126 KKGAYHWNDQAQVAFEAVKKALVTVPVLALPDFSKVFIVETDASQTGIGAVLMQEGHPLA 947
            K  A+ W   AQ AFE +K AL   PVL+LP F K F+VETDA   GIGAVLMQEGHPLA
Sbjct: 860  KTDAFEWTAVAQQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEGHPLA 919

Query: 946  YISRTLGPKWCSLSVYEKELLAIVFAIQKWSQYLTGSHFIIKTDQKSLKWLLDQKVTTPF 767
            YISR L  K   LS+YEKELLA++FA++KW  YL  SHFIIKTDQ+SLK+LL+Q++ TP 
Sbjct: 920  YISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPI 979

Query: 766  QQLWLSKLLGFDYEIQYKKGTTNVVADALSRLQGSEVLCMAISVVSSDLEELIQTSYKQD 587
            QQ WL KLL FDYEIQY++G  NVVADALSR++GSEVL MA++VV  DL + IQ  Y  D
Sbjct: 980  QQQWLPKLLEFDYEIQYRQGKENVVADALSRVEGSEVLHMAMTVVECDLLKDIQAGYAND 1039

Query: 586  DGLQTICNKLLNGETVHKY-SMQGGLLKKNDKVVIGADNTLKAKILAWHHSSPEGGHSGR 410
              LQ I   L       KY S    +L++  K+V+ A++ +K  IL W H S  GGHSGR
Sbjct: 1040 SQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKNTILLWLHGSGVGGHSGR 1099

Query: 409  DVTVRRVKSIFTWKGLHKDVNQWIRQCQTCQQEKYEALAYPGSLQPLPIPHEVWTDVSMD 230
            DVT +RVK +F WKG+ KD+  +IR C TCQQ K +  A PG LQPLPIP  +W++VSMD
Sbjct: 1100 DVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLPIPDTIWSEVSMD 1159

Query: 229  FITGLPNSHGYSVILVVVDRLSKFAHFIPLKHPFDALQVAQAYIDYVFKLHGWPQSIVSD 50
            FI GLP S G +VI+VVVDRLSK AHFI L HP+ AL VA AY+D VFKLHG P SIVSD
Sbjct: 1160 FIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVSD 1219

Query: 49   RDPIFLSNFWKSLFEL 2
            RD +F S FW+  F L
Sbjct: 1220 RDVVFTSEFWREFFTL 1235


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score =  422 bits (1085), Expect = e-116
 Identities = 216/376 (57%), Positives = 269/376 (71%), Gaps = 1/376 (0%)
 Frame = -3

Query: 1126 KKGAYHWNDQAQVAFEAVKKALVTVPVLALPDFSKVFIVETDASQTGIGAVLMQEGHPLA 947
            K   + W+ +AQ AF+ +K  L   PVLALP F K F+VETDA   GI AVLMQ+GHPLA
Sbjct: 831  KTDGFCWSLEAQSAFDTLKAVLCNAPVLALPVFDKQFMVETDACGQGIRAVLMQKGHPLA 890

Query: 946  YISRTLGPKWCSLSVYEKELLAIVFAIQKWSQYLTGSHFIIKTDQKSLKWLLDQKVTTPF 767
            YISR L  K   LS+YEKELLA +FA++KW  YL  SHFIIKTDQ+SLK+LL+Q++ TP 
Sbjct: 891  YISRQLKGKQLHLSIYEKELLAFIFAVRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPV 950

Query: 766  QQLWLSKLLGFDYEIQYKKGTTNVVADALSRLQGSEVLCMAISVVSSDLEELIQTSYKQD 587
            QQ WL KLL FDYEIQY++G  N+VADALSR++GSEVL MA+S+V  D  + IQ +Y+ D
Sbjct: 951  QQQWLPKLLEFDYEIQYRQGKENLVADALSRVEGSEVLHMALSIVECDFLKEIQVAYESD 1010

Query: 586  DGLQTICNKLLNGETVHK-YSMQGGLLKKNDKVVIGADNTLKAKILAWHHSSPEGGHSGR 410
              L+ I + L       K YS    +L++  K+V+  D  +  K+L W H S  GG SGR
Sbjct: 1011 GVLKDIISALQQHPDAKKHYSWSQDILRRKSKIVVPNDVEITNKLLQWLHCSGMGGRSGR 1070

Query: 409  DVTVRRVKSIFTWKGLHKDVNQWIRQCQTCQQEKYEALAYPGSLQPLPIPHEVWTDVSMD 230
            D + +RVKS+F WKG+ KD+  +IR C TCQQ K +  AYPG LQPLPIP ++W DVSMD
Sbjct: 1071 DASHQRVKSLFYWKGMVKDIQAFIRSCGTCQQCKSDNAAYPGLLQPLPIPDKIWCDVSMD 1130

Query: 229  FITGLPNSHGYSVILVVVDRLSKFAHFIPLKHPFDALQVAQAYIDYVFKLHGWPQSIVSD 50
            FI GLPNS G SVI+VVVDRLSK AHF+ L HP+ AL VAQA++D V+K HG P SIVSD
Sbjct: 1131 FIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPTSIVSD 1190

Query: 49   RDPIFLSNFWKSLFEL 2
            RD +F S+FWK  F+L
Sbjct: 1191 RDVLFTSDFWKEFFKL 1206


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  393 bits (1009), Expect = e-107
 Identities = 193/374 (51%), Positives = 265/374 (70%), Gaps = 1/374 (0%)
 Frame = -3

Query: 1123 KGAYHWNDQAQVAFEAVKKALVTVPVLALPDFSKVFIVETDASQTGIGAVLMQEGHPLAY 944
            K  + W ++   AF+ +KKA+   PVLALPDF+  F +ETDAS  G+GAVL+Q+G P+A+
Sbjct: 489  KEGFKWTNERHYAFQQLKKAVSAAPVLALPDFTIDFTIETDASGIGVGAVLLQKGRPIAF 548

Query: 943  ISRTLGPKWCSLSVYEKELLAIVFAIQKWSQYLTGSHFIIKTDQKSLKWLLDQKVTTPFQ 764
            +S+ L P+   LS YE+E+LAIV A+QKW  YL G HF IKTD +SLK+L++Q+V+TP Q
Sbjct: 549  MSKPLSPRNRQLSTYEREMLAIVIAVQKWRPYLIGRHFKIKTDHQSLKYLMEQRVSTPSQ 608

Query: 763  QLWLSKLLGFDYEIQYKKGTTNVVADALSRLQGSEVLCMAISVVSSDLEELIQTSYKQDD 584
            Q W++KL+G+DYE+ YKKG  NVVADALSR        +A+S + +DL + I+ S+  DD
Sbjct: 609  QKWVAKLMGYDYELIYKKGQENVVADALSR----SPTLLAVSAIHTDLLDQIKWSWNVDD 664

Query: 583  GLQTICN-KLLNGETVHKYSMQGGLLKKNDKVVIGADNTLKAKILAWHHSSPEGGHSGRD 407
             L+ I   K  +  +  +Y+     L++  K+V+G+D  LK +++   H+S  GGHSG +
Sbjct: 665  KLKKIIQQKQSDINSWPRYTWVQDQLRRKGKLVVGSDPGLKLQLIHNFHASSIGGHSGME 724

Query: 406  VTVRRVKSIFTWKGLHKDVNQWIRQCQTCQQEKYEALAYPGSLQPLPIPHEVWTDVSMDF 227
             T R++K  F WKGL +DV Q++R+C  CQQ KYE  A  G LQPLPIP  +WT++SMDF
Sbjct: 725  ATTRKLKGQFYWKGLRRDVEQFVRECSVCQQNKYETTAPAGLLQPLPIPEGIWTEISMDF 784

Query: 226  ITGLPNSHGYSVILVVVDRLSKFAHFIPLKHPFDALQVAQAYIDYVFKLHGWPQSIVSDR 47
            I GLPNS G  VI+VVVDRLSK+AHFI L HP+ A  VAQ ++D ++KLHG P+SIVSDR
Sbjct: 785  IEGLPNSQGKEVIMVVVDRLSKYAHFIALSHPYTASSVAQLFLDNIYKLHGMPRSIVSDR 844

Query: 46   DPIFLSNFWKSLFE 5
            D IF+S FW+ LF+
Sbjct: 845  DTIFVSQFWQELFK 858


>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  387 bits (993), Expect = e-105
 Identities = 192/375 (51%), Positives = 262/375 (69%), Gaps = 1/375 (0%)
 Frame = -3

Query: 1126 KKGAYHWNDQAQVAFEAVKKALVTVPVLALPDFSKVFIVETDASQTGIGAVLMQEGHPLA 947
            +K  +HW+  A  AF  +K ALV  PVLA+PD  K F VETDAS TGIGAVL+Q+ HP+A
Sbjct: 856  RKDGFHWSAAASAAFLQLKNALVQAPVLAIPDLQKPFTVETDASSTGIGAVLLQDKHPVA 915

Query: 946  YISRTLGPKWCSLSVYEKELLAIVFAIQKWSQYLTGSHFIIKTDQKSLKWLLDQKVTTPF 767
            +IS+ L P+   LSVY++ELLA+V A+ KW QYL    F I TDQ+SLK+LL+Q+++TP 
Sbjct: 916  FISKVLSPRNRLLSVYDRELLALVHAVTKWHQYLAIQQFTILTDQQSLKFLLEQRLSTPA 975

Query: 766  QQLWLSKLLGFDYEIQYKKGTTNVVADALSRLQGSEVLCMAISVVSSDLEELIQTSYKQD 587
            Q  W++KL+G  Y IQYK+G  NVVADALSR    E+  +++S VSS+L  L+  +Y  D
Sbjct: 976  QYRWVTKLMGLSYVIQYKRGKENVVADALSRASHGELFQLSVSSVSSELWGLLTQAYAAD 1035

Query: 586  DGLQTICNKLLNGETVH-KYSMQGGLLKKNDKVVIGADNTLKAKILAWHHSSPEGGHSGR 410
            + LQ + +++L    +H  YS+  G L +  +++I  ++ ++  IL W HSS +GGHSG 
Sbjct: 1036 EALQQLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGI 1095

Query: 409  DVTVRRVKSIFTWKGLHKDVNQWIRQCQTCQQEKYEALAYPGSLQPLPIPHEVWTDVSMD 230
              TV R+KS+F WKGL KDV  +I++C+TC + KYE +A PG LQPLPIP  VW  ++MD
Sbjct: 1096 RATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAMD 1155

Query: 229  FITGLPNSHGYSVILVVVDRLSKFAHFIPLKHPFDALQVAQAYIDYVFKLHGWPQSIVSD 50
            FI  LP SHG   I VV+DRLSK+AHFIPL HP+ A  +A+ +I  V++LHG P +IVSD
Sbjct: 1156 FIDKLPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLAEIFIKEVYRLHGAPSNIVSD 1215

Query: 49   RDPIFLSNFWKSLFE 5
            RDP+F S FW +  +
Sbjct: 1216 RDPLFTSTFWTAFLQ 1230


>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  387 bits (993), Expect = e-105
 Identities = 191/375 (50%), Positives = 262/375 (69%), Gaps = 1/375 (0%)
 Frame = -3

Query: 1126 KKGAYHWNDQAQVAFEAVKKALVTVPVLALPDFSKVFIVETDASQTGIGAVLMQEGHPLA 947
            +K  +HW+  A  AF  +K ALV  PVLA+PD  K F VETDAS TGIGAVL+Q+ HP+A
Sbjct: 856  RKDGFHWSAAASAAFLQLKNALVQAPVLAIPDLQKPFTVETDASSTGIGAVLLQDKHPVA 915

Query: 946  YISRTLGPKWCSLSVYEKELLAIVFAIQKWSQYLTGSHFIIKTDQKSLKWLLDQKVTTPF 767
            +IS+ L P+   LSVY++ELLA+V A+ KW QYL    F I TDQ+SLK+LL+Q+++TP 
Sbjct: 916  FISKVLSPRNRLLSVYDRELLALVHAVTKWHQYLAIQQFTILTDQQSLKFLLEQRLSTPA 975

Query: 766  QQLWLSKLLGFDYEIQYKKGTTNVVADALSRLQGSEVLCMAISVVSSDLEELIQTSYKQD 587
            Q  W++KL+G  Y IQYK+G  NVVADALSR    E+  +++S +SS+L  L+  +Y  D
Sbjct: 976  QYRWVTKLMGLSYVIQYKRGKENVVADALSRASHGELFQLSVSSISSELGGLLTQAYAAD 1035

Query: 586  DGLQTICNKLLNGETVH-KYSMQGGLLKKNDKVVIGADNTLKAKILAWHHSSPEGGHSGR 410
            + LQ + +++L    +H  YS+  G L +  +++I  ++ ++  IL W HSS +GGHSG 
Sbjct: 1036 EALQQLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGI 1095

Query: 409  DVTVRRVKSIFTWKGLHKDVNQWIRQCQTCQQEKYEALAYPGSLQPLPIPHEVWTDVSMD 230
              TV R+KS+F WKGL KDV  +I++C+TC + KYE +A PG LQPLPIP  VW  ++MD
Sbjct: 1096 RATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAMD 1155

Query: 229  FITGLPNSHGYSVILVVVDRLSKFAHFIPLKHPFDALQVAQAYIDYVFKLHGWPQSIVSD 50
            FI  LP SHG   I VV+DRLSK+AHFIPL HP+ A  +A+ +I  V++LHG P +IVSD
Sbjct: 1156 FIDKLPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLAEIFIKEVYRLHGAPSNIVSD 1215

Query: 49   RDPIFLSNFWKSLFE 5
            RDP+F S FW +  +
Sbjct: 1216 RDPLFTSTFWTAFLQ 1230