BLASTX nr result

ID: Bupleurum21_contig00035493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035493
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   248   3e-64
ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp....   152   3e-35
ref|YP_005415556.1| hypothetical protein RSPPHO_03247, partial [...   132   2e-29
ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [...   132   2e-29
ref|ZP_08244251.1| Hypothetical protein APO_2582 [Acetobacter po...   130   1e-28

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score =  248 bits (634), Expect = 3e-64
 Identities = 115/118 (97%), Positives = 116/118 (98%)
 Frame = +3

Query: 3   TAPKQTKRCVPHSRRTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKD 182
           TAPKQTKRC+PHSR TASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKD
Sbjct: 394 TAPKQTKRCMPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKD 453

Query: 183 CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGPMITHDFC 356
           CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSI PMITHDFC
Sbjct: 454 CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIRPMITHDFC 511


>ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp. mays]
           gi|40795104|gb|AAR91148.1| hypothetical protein
           (mitochondrion) [Zea mays]
          Length = 111

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/73 (94%), Positives = 70/73 (95%)
 Frame = +3

Query: 6   APKQTKRCVPHSRRTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDC 185
           APKQ KRCVPHSR TAS+ILEEGGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDC
Sbjct: 39  APKQRKRCVPHSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDC 98

Query: 186 LSSDCSLQLGNMK 224
           LSSDCSLQLGNMK
Sbjct: 99  LSSDCSLQLGNMK 111


>ref|YP_005415556.1| hypothetical protein RSPPHO_03247, partial [Rhodospirillum
           photometricum DSM 122] gi|378401470|emb|CCG06586.1|
           unnamed protein product, partial [Rhodospirillum
           photometricum DSM 122]
          Length = 137

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/96 (67%), Positives = 71/96 (73%)
 Frame = +3

Query: 36  HSRRTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLG 215
           HS  TA D  EEGGDDVKS+WPL AG HTCYNG YNG    +   I K CLSSDC+LQLG
Sbjct: 18  HSGETAGDKPEEGGDDVKSSWPLRAGLHTCYNGIYNGSPPRERALISKRCLSSDCTLQLG 77

Query: 216 NMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFAR 323
            MK ESLVI DQHA VN +PG VHTARHT+G+G  R
Sbjct: 78  CMKSESLVIVDQHATVNTFPGLVHTARHTMGVGSTR 113


>ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [Rhodospirillum
           photometricum DSM 122] gi|378401450|emb|CCG06566.1|
           Putative uncharacterized protein, partial
           [Rhodospirillum photometricum DSM 122]
          Length = 161

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/96 (67%), Positives = 71/96 (73%)
 Frame = +3

Query: 36  HSRRTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLG 215
           HS  TA D  EEGGDDVKS+WPL AG HTCYNG YNG    +   I K CLSSDC+LQLG
Sbjct: 42  HSGETAGDKPEEGGDDVKSSWPLRAGLHTCYNGIYNGSPPRERALISKRCLSSDCTLQLG 101

Query: 216 NMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFAR 323
            MK ESLVI DQHA VN +PG VHTARHT+G+G  R
Sbjct: 102 CMKSESLVIVDQHATVNTFPGLVHTARHTMGVGSTR 137


>ref|ZP_08244251.1| Hypothetical protein APO_2582 [Acetobacter pomorum DM001]
           gi|326695170|gb|EGE46866.1| Hypothetical protein
           APO_2582 [Acetobacter pomorum DM001]
          Length = 105

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/97 (67%), Positives = 72/97 (74%)
 Frame = +3

Query: 36  HSRRTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLG 215
           HSR TA D  EEGGDDVKS+WPL  G HTCYNG  +GK G     I K  LSSDC+LQL 
Sbjct: 8   HSRETAGDKPEEGGDDVKSSWPLCPGLHTCYNGGDSGKLGGDTMLISKSRLSSDCTLQLE 67

Query: 216 NMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARS 326
            MK+ESLVIADQHAAVN +PG VHTARHT+G+G   S
Sbjct: 68  CMKVESLVIADQHAAVNTFPGLVHTARHTMGVGLTLS 104


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