BLASTX nr result

ID: Bupleurum21_contig00035492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035492
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311805.1| chromatin remodeling complex subunit [Populu...   127   7e-28
ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   104   8e-21
ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206...   104   8e-21
emb|CBI26124.3| unnamed protein product [Vitis vinifera]              104   8e-21

>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222851625|gb|EEE89172.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 3427

 Score =  127 bits (320), Expect = 7e-28
 Identities = 74/141 (52%), Positives = 93/141 (65%), Gaps = 3/141 (2%)
 Frame = -3

Query: 414  DDPEISRTSFR-SSDGSRMVPVDSALLNDNLLTAGVTD-DASAASDS-PLPKYTTTEKWI 244
            DD  +S    R + DG ++VPVD +L N    T    D D SA++DS P PKYT +EKWI
Sbjct: 670  DDSRLSEFQTRYAPDGYKVVPVDVSLRNGISFTTEQDDEDKSASTDSQPSPKYTMSEKWI 729

Query: 243  LDQQKRKLLTQRIWSLKLQRTQQRITAFXXXXXXXXXXXXDIFAKTRSIIESKKLQLLEL 64
            +D Q++KLLT++ W LK QRT+QRI+              DI AKT+S+IE KKLQLLEL
Sbjct: 730  MDHQRKKLLTEQNWVLKQQRTKQRISTCFYKLKETVSFSKDISAKTKSVIELKKLQLLEL 789

Query: 63   QSRFRNDILNDFFKPIASDMD 1
            Q R R+D LNDFFKPI +DMD
Sbjct: 790  QRRLRSDFLNDFFKPITNDMD 810


>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
            gi|223543945|gb|EEF45471.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 3502

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/103 (60%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = -3

Query: 306  DDASAASDSP-LPKYTTTEKWILDQQKRKLLTQRIWSLKLQRTQQRITAFXXXXXXXXXX 130
            +D SA+SDSP  PKYT +EKWI+DQQK+KLL ++ W LK Q+T+QRI             
Sbjct: 692  EDKSASSDSPPSPKYTMSEKWIMDQQKKKLLVEQNWVLKQQKTKQRIATCFAKLKETVNS 751

Query: 129  XXDIFAKTRSIIESKKLQLLELQSRFRNDILNDFFKPIASDMD 1
              DI AKT+S+IE KKLQLLELQ R R+D LNDFFKPI SDMD
Sbjct: 752  SEDICAKTKSVIELKKLQLLELQRRLRSDFLNDFFKPITSDMD 794


>ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206586,
           partial [Cucumis sativus]
          Length = 2108

 Score =  104 bits (259), Expect = 8e-21
 Identities = 59/114 (51%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
 Frame = -3

Query: 336 NDNLLTAGVTDDA-SAASDSPL-PKYTTTEKWILDQQKRKLLTQRIWSLKLQRTQQRITA 163
           N +L T    D+  S  SD P+ PK T +EKWI+D+QK+KLL ++ W LK Q+T++RI  
Sbjct: 638 NGSLNTMEQEDNGKSMPSDLPMSPKNTMSEKWIMDRQKKKLLNEQNWLLKQQKTEKRIIT 697

Query: 162 FXXXXXXXXXXXXDIFAKTRSIIESKKLQLLELQSRFRNDILNDFFKPIASDMD 1
                        DI AKTRS+IE KKLQLL+LQ R RND LNDFFKPI+++MD
Sbjct: 698 CFDKLKETVSSSEDISAKTRSVIELKKLQLLQLQRRLRNDFLNDFFKPISTEMD 751


>ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206586, partial [Cucumis
           sativus]
          Length = 2086

 Score =  104 bits (259), Expect = 8e-21
 Identities = 59/114 (51%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
 Frame = -3

Query: 336 NDNLLTAGVTDDA-SAASDSPL-PKYTTTEKWILDQQKRKLLTQRIWSLKLQRTQQRITA 163
           N +L T    D+  S  SD P+ PK T +EKWI+D+QK+KLL ++ W LK Q+T++RI  
Sbjct: 639 NGSLNTMEQEDNGKSMPSDLPMSPKNTMSEKWIMDRQKKKLLNEQNWLLKQQKTEKRIIT 698

Query: 162 FXXXXXXXXXXXXDIFAKTRSIIESKKLQLLELQSRFRNDILNDFFKPIASDMD 1
                        DI AKTRS+IE KKLQLL+LQ R RND LNDFFKPI+++MD
Sbjct: 699 CFDKLKETVSSSEDISAKTRSVIELKKLQLLQLQRRLRNDFLNDFFKPISTEMD 752


>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score =  104 bits (259), Expect = 8e-21
 Identities = 62/146 (42%), Positives = 82/146 (56%), Gaps = 8/146 (5%)
 Frame = -3

Query: 414  DDPEISRTSFRS-SDGSRMVPVDSALLN-------DNLLTAGVTDDASAASDSPLPKYTT 259
            DD +++    R  SDG + V +D    N       +     G  D     +  P PK TT
Sbjct: 700  DDSKVTEIQTRCISDGCKAVAIDDTTKNGYPYKMVEKSAEQGDEDRPMLVNLPPSPKCTT 759

Query: 258  TEKWILDQQKRKLLTQRIWSLKLQRTQQRITAFXXXXXXXXXXXXDIFAKTRSIIESKKL 79
            +EKWI+DQQKR+L  ++ W LK Q+T+++I A             DI AKT+S+IE KKL
Sbjct: 760  SEKWIMDQQKRRLHVEQNWLLKEQKTEKKIAACFEKLKGTVSSSEDISAKTKSVIELKKL 819

Query: 78   QLLELQSRFRNDILNDFFKPIASDMD 1
            QLL LQ R R D LNDFFKPIA ++D
Sbjct: 820  QLLALQRRLRRDFLNDFFKPIAIELD 845


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