BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035468
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604017.1| Pentatricopeptide repeat-containing protein ...   166   1e-39
ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   144   7e-33
emb|CBI37965.3| unnamed protein product [Vitis vinifera]              105   4e-21

>ref|XP_003604017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493065|gb|AES74268.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 742

 Score =  166 bits (421), Expect = 1e-39
 Identities = 84/137 (61%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
 Frame = -1

Query: 410 KLIYSYTKCISKNHSRTLTN-FFTCINPRTPLPFNYIISHFCKNDFHSLAIKTFTFMHFH 234
           +LI +YT     N+ +TLTN FF C+N   PL FN IISHFC+  F  LA+ TF+FMH +
Sbjct: 232 QLISTYTSFFPSNNLQTLTNSFFKCMNSTNPLHFNVIISHFCRKGFPFLALTTFSFMHTN 291

Query: 233 GVVIDTYALCSSLTASSCIKDVNFGKLIHAHVEKSGFATSVFVGSALVHLYVKLLLIDDA 54
            V +DTYALCS+LTASS  KDVNFGK IHAHVEKSG+++SVFVGSAL+  Y KLL + DA
Sbjct: 292 HVPLDTYALCSTLTASSKFKDVNFGKQIHAHVEKSGWSSSVFVGSALIDFYSKLLNVKDA 351

Query: 53  VHMFDQIPMKNTVCVNA 3
             +FD+IP +NTVC NA
Sbjct: 352 ALVFDEIPDRNTVCANA 368


>ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 472

 Score =  164 bits (416), Expect = 5e-39
 Identities = 78/136 (57%), Positives = 101/136 (74%)
 Frame = -1

Query: 410 KLIYSYTKCISKNHSRTLTNFFTCINPRTPLPFNYIISHFCKNDFHSLAIKTFTFMHFHG 231
           +LI +Y  C+  N+ ++L NFF C+N   PL FN IIS FC+     LA+ +F+F+H +G
Sbjct: 44  QLIATYAACLPNNNLQSLNNFFKCMNSTNPLHFNAIISDFCRKGLPFLALASFSFVHANG 103

Query: 230 VVIDTYALCSSLTASSCIKDVNFGKLIHAHVEKSGFATSVFVGSALVHLYVKLLLIDDAV 51
           V +DTYALCS+LTASS +KD+N GK IHAHV KSG+++SVFVGSAL+  Y KL  + DA 
Sbjct: 104 VPLDTYALCSTLTASSKVKDLNLGKQIHAHVAKSGWSSSVFVGSALIDFYSKLSNVKDAA 163

Query: 50  HMFDQIPMKNTVCVNA 3
           HMFD+IP KNTVC NA
Sbjct: 164 HMFDEIPEKNTVCANA 179


>ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 469

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/136 (54%), Positives = 95/136 (69%)
 Frame = -1

Query: 410 KLIYSYTKCISKNHSRTLTNFFTCINPRTPLPFNYIISHFCKNDFHSLAIKTFTFMHFHG 231
           KLI SY++ I    +++L   F CI PRT L FN +IS F ++ F   A+  F+FMH +G
Sbjct: 47  KLILSYSQIIPNFDAKSLNGIFQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNG 106

Query: 230 VVIDTYALCSSLTASSCIKDVNFGKLIHAHVEKSGFATSVFVGSALVHLYVKLLLIDDAV 51
           V IDTYALCSSL   S +++V +GK IHA V KSG+  SVFVGSA+V +Y K  LI DAV
Sbjct: 107 VPIDTYALCSSLNGCSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAV 166

Query: 50  HMFDQIPMKNTVCVNA 3
            +FD++PMKNTVC NA
Sbjct: 167 EVFDEMPMKNTVCANA 182


>ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g18750, chloroplastic-like [Cucumis sativus]
          Length = 497

 Score =  144 bits (363), Expect = 7e-33
 Identities = 74/136 (54%), Positives = 93/136 (68%)
 Frame = -1

Query: 410 KLIYSYTKCISKNHSRTLTNFFTCINPRTPLPFNYIISHFCKNDFHSLAIKTFTFMHFHG 231
           KLI SY++ I    +++L   F CI PRT L FN +IS F ++ F   A+  F+FMH +G
Sbjct: 75  KLILSYSQIIPNFDAKSLNGIFQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNG 134

Query: 230 VVIDTYALCSSLTASSCIKDVNFGKLIHAHVEKSGFATSVFVGSALVHLYVKLLLIDDAV 51
           V IDTYALCSSL   S  + V +GK IHA V KSG+  SVFVGSA+V +Y K  LI DAV
Sbjct: 135 VPIDTYALCSSLNGCSLFRXVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAV 194

Query: 50  HMFDQIPMKNTVCVNA 3
            +FD++PMKNTVC NA
Sbjct: 195 EVFDEMPMKNTVCANA 210


>emb|CBI37965.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/81 (62%), Positives = 63/81 (77%)
 Frame = -1

Query: 245 MHFHGVVIDTYALCSSLTASSCIKDVNFGKLIHAHVEKSGFATSVFVGSALVHLYVKLLL 66
           MH +GV +DTY+ C SL AS  +K+V FG  IHA VEKSG+ +SVFVGSALV +Y KL L
Sbjct: 1   MHTNGVPLDTYSFCCSLVASCSMKNVKFGAQIHARVEKSGWLSSVFVGSALVDMYAKLSL 60

Query: 65  IDDAVHMFDQIPMKNTVCVNA 3
           I+DA  +FD+IP+KNTVC NA
Sbjct: 61  INDAAMVFDEIPVKNTVCANA 81