BLASTX nr result

ID: Bupleurum21_contig00035444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035444
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299045.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002330609.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002317084.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002330608.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002330611.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>ref|XP_002299045.1| predicted protein [Populus trichocarpa] gi|222846303|gb|EEE83850.1|
           predicted protein [Populus trichocarpa]
          Length = 533

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/86 (65%), Positives = 69/86 (80%), Gaps = 2/86 (2%)
 Frame = -3

Query: 252 ETDEAAR--IEWIRGLRDYLTPYVTSNPRSAYVNYVNLWMGTNNPTGTTSYQQASRWGKR 79
           E+ EA+R  + WIR L  YLT YV+ NPR AYVNY +L +G NN TGTTSY+QAS WG++
Sbjct: 440 ESKEASRRHMAWIRRLYSYLTKYVSKNPREAYVNYRDLDLGINNLTGTTSYKQASIWGRK 499

Query: 78  YFKNNFDRLIKVKSVVDPDNFFRHEQ 1
           YFKNNFDRL++VK+ VDP NFFR+EQ
Sbjct: 500 YFKNNFDRLVRVKTEVDPTNFFRNEQ 525


>ref|XP_002330609.1| predicted protein [Populus trichocarpa] gi|222872167|gb|EEF09298.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/100 (56%), Positives = 73/100 (73%), Gaps = 4/100 (4%)
 Frame = -3

Query: 288 GTLFKFNMFVQ-TETDEAA---RIEWIRGLRDYLTPYVTSNPRSAYVNYVNLWMGTNNPT 121
           G L+K + +V  TE  + A    I WIR L  Y+TPYV+ NPR AYVNY +L +G NN  
Sbjct: 427 GNLYKIHYYVAWTEEGKEASERHISWIRRLYSYMTPYVSKNPREAYVNYRDLDLGINNLA 486

Query: 120 GTTSYQQASRWGKRYFKNNFDRLIKVKSVVDPDNFFRHEQ 1
           G TSY+QAS WG++YFKNNFD+L+++K+ VDP NFFR+EQ
Sbjct: 487 GNTSYKQASIWGRKYFKNNFDKLVRIKTEVDPANFFRNEQ 526


>ref|XP_002317084.1| predicted protein [Populus trichocarpa] gi|222860149|gb|EEE97696.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
 Frame = -3

Query: 258 QTETDEAAR--IEWIRGLRDYLTPYVTSNPRSAYVNYVNLWMGTNNPTGTTSYQQASRWG 85
           + E+ EA++  I WIR L +Y+TPYV+ NPR  YVNY +L +G N   G TSY+QAS WG
Sbjct: 422 EEESSEASQRYISWIRRLLNYMTPYVSKNPRQVYVNYRDLDLGINKLDGNTSYKQASIWG 481

Query: 84  KRYFKNNFDRLIKVKSVVDPDNFFRHEQ 1
           ++YFKNNFDRL++VK+ VDP NFFRHEQ
Sbjct: 482 RKYFKNNFDRLVRVKTAVDPANFFRHEQ 509


>ref|XP_002330608.1| predicted protein [Populus trichocarpa] gi|222872166|gb|EEF09297.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 4/100 (4%)
 Frame = -3

Query: 288 GTLFKFNMFV----QTETDEAARIEWIRGLRDYLTPYVTSNPRSAYVNYVNLWMGTNNPT 121
           G L+K    +    Q +      I WIR L  Y  PYV+ NPR AY+NY +L +G NN  
Sbjct: 429 GNLYKIQYLLLWNEQGKEASMRHIAWIRRLYSYTAPYVSKNPREAYINYRDLDVGMNNIQ 488

Query: 120 GTTSYQQASRWGKRYFKNNFDRLIKVKSVVDPDNFFRHEQ 1
           G TSY+QAS WG++YFKNNFDRLI+VK+ VDPDNFFR+EQ
Sbjct: 489 GNTSYKQASIWGRKYFKNNFDRLIQVKTAVDPDNFFRNEQ 528


>ref|XP_002330611.1| predicted protein [Populus trichocarpa] gi|222872169|gb|EEF09300.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/100 (53%), Positives = 73/100 (73%), Gaps = 4/100 (4%)
 Frame = -3

Query: 288 GTLFKFNMFVQ--TETDEAAR--IEWIRGLRDYLTPYVTSNPRSAYVNYVNLWMGTNNPT 121
           G ++K    V    E  EA++  ++WIR L  Y+TPYV+ NPR AY+NY +L +G N+  
Sbjct: 396 GNIYKIEHQVSWSEEGKEASKRHVDWIRRLYSYMTPYVSKNPREAYINYRDLDIGMNSLA 455

Query: 120 GTTSYQQASRWGKRYFKNNFDRLIKVKSVVDPDNFFRHEQ 1
           G TSY+QAS WG++YFKNNFD+L++VK+ VDP NFFR+EQ
Sbjct: 456 GNTSYEQASIWGRKYFKNNFDKLVRVKTAVDPANFFRNEQ 495


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