BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035437
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   117   9e-27
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   115   3e-26
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   114   2e-25
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   108   1e-24
gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]     112   1e-24

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  117 bits (293), Expect(2) = 9e-27
 Identities = 54/132 (40%), Positives = 87/132 (65%)
 Frame = -1

Query: 431 QKINSSKSSVFFSCNTDDRTKNEVCDKLQFQEADESCQYLGLPNIIGRNKSAIFGFLKEK 252
           Q+IN +KS++ FS NTDD  K  +C  LQ +E  +   YLG+P ++G+NK  +F F++ K
Sbjct: 180 QEINLNKSALTFSRNTDDVVKRGICSILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRRK 239

Query: 251 LRHRIQGWDKKYLSKGGREILLKIVSQTLPNYAMSMFLIPVGVCKEMERMMCEYWWQSSP 72
           + +RIQ W+ + LS+ G+EI LK V+Q++P Y M + L+P  +C+++E MM  ++W S+P
Sbjct: 240 VWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNGFFWDSNP 299

Query: 71  DKATGIHWRYTG 36
            +   I W   G
Sbjct: 300 -QCRSIRWMSWG 310



 Score = 27.7 bits (60), Expect(2) = 9e-27
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 45  IHWMSWERMCKSKSN 1
           I WMSW +MCK K +
Sbjct: 304 IRWMSWGKMCKQKKD 318


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  115 bits (287), Expect(2) = 3e-26
 Identities = 52/128 (40%), Positives = 85/128 (66%)
 Frame = -1

Query: 431  QKINSSKSSVFFSCNTDDRTKNEVCDKLQFQEADESCQYLGLPNIIGRNKSAIFGFLKEK 252
            Q+IN +K ++ FS NTDD  K  +C  LQ +E  +   YLG+P ++G+NK  +F F++ K
Sbjct: 1267 QEINLNKXALTFSRNTDDVVKRGICSILQVEEQADPGIYLGMPAVVGKNKRQLFEFVRRK 1326

Query: 251  LRHRIQGWDKKYLSKGGREILLKIVSQTLPNYAMSMFLIPVGVCKEMERMMCEYWWQSSP 72
            + +RIQ W+ + LS+ G+EI LK V+Q++P Y M + L+P  +C+++E MM  ++W S+P
Sbjct: 1327 VWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNXFFWDSNP 1386

Query: 71   DKATGIHW 48
             +   I W
Sbjct: 1387 -QXRSIRW 1393



 Score = 28.1 bits (61), Expect(2) = 3e-26
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 45   IHWMSWERMCKSKSN 1
            I WMSW +MCK K +
Sbjct: 1391 IRWMSWXKMCKQKKD 1405


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  114 bits (284), Expect(2) = 2e-25
 Identities = 56/128 (43%), Positives = 81/128 (63%)
 Frame = -1

Query: 431 QKINSSKSSVFFSCNTDDRTKNEVCDKLQFQEADESCQYLGLPNIIGRNKSAIFGFLKEK 252
           Q IN  KSS+ FS NT    ++ +   L   +   + +YLGLP  IG+++   F ++K+K
Sbjct: 293 QVINKEKSSMMFSPNTGQHDRSLMRSNLSITDEASTEKYLGLPVNIGKSRKKPFEYIKKK 352

Query: 251 LRHRIQGWDKKYLSKGGREILLKIVSQTLPNYAMSMFLIPVGVCKEMERMMCEYWWQSSP 72
           +  RIQGW +K LSK G+EIL+K V+Q++P YAMS F +  G+C E+  ++  YWW S  
Sbjct: 353 IWSRIQGWQEKLLSKAGKEILIKAVAQSIPTYAMSCFDLTKGLCDELSSIIGRYWW-SQQ 411

Query: 71  DKATGIHW 48
           DKA  IHW
Sbjct: 412 DKANKIHW 419



 Score = 26.9 bits (58), Expect(2) = 2e-25
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 48  EIHWMSWERMCKSK 7
           +IHW+SWE++ +SK
Sbjct: 416 KIHWISWEKLTQSK 429


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  108 bits (269), Expect(2) = 1e-24
 Identities = 49/128 (38%), Positives = 79/128 (61%)
 Frame = -1

Query: 431 QKINSSKSSVFFSCNTDDRTKNEVCDKLQFQEADESCQYLGLPNIIGRNKSAIFGFLKEK 252
           Q+IN SKSS+ F    +D  K ++   L          YLGLP  +G +K+ +F F++++
Sbjct: 496 QQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDR 555

Query: 251 LRHRIQGWDKKYLSKGGREILLKIVSQTLPNYAMSMFLIPVGVCKEMERMMCEYWWQSSP 72
           L+ RI GW  K+LSKGG+E+++K V+ TLP Y MS F +P  +  ++   + ++WW S+ 
Sbjct: 556 LQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNG 615

Query: 71  DKATGIHW 48
           D + G+HW
Sbjct: 616 D-SRGMHW 622



 Score = 30.0 bits (66), Expect(2) = 1e-24
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = -3

Query: 45  IHWMSWERMCKSKSN 1
           +HWM+W+++C SKS+
Sbjct: 620 MHWMAWDKLCSSKSD 634


>gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1264

 Score =  112 bits (280), Expect(2) = 1e-24
 Identities = 58/128 (45%), Positives = 80/128 (62%)
 Frame = -1

Query: 431  QKINSSKSSVFFSCNTDDRTKNEVCDKLQFQEADESCQYLGLPNIIGRNKSAIFGFLKEK 252
            Q IN  KSSV FS NT    + EV   L   +  ++ +YLGLP  IG+++   F ++K K
Sbjct: 1060 QVINKDKSSVLFSPNTLQSDRMEVRSALCINQEAKNERYLGLPVSIGKSRRKAFEYIKRK 1119

Query: 251  LRHRIQGWDKKYLSKGGREILLKIVSQTLPNYAMSMFLIPVGVCKEMERMMCEYWWQSSP 72
            +  RIQGW +K LSK G+EIL+K V+Q +P YAMS F +  G+C E+  M+ ++WW S  
Sbjct: 1120 VWLRIQGWQEKLLSKAGKEILVKAVAQAIPTYAMSCFDLTKGLCDEINSMISKWWW-SQN 1178

Query: 71   DKATGIHW 48
            DK   IHW
Sbjct: 1179 DKENKIHW 1186



 Score = 25.4 bits (54), Expect(2) = 1e-24
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 48   EIHWMSWERMCKSK 7
            +IHW+SWE+M   K
Sbjct: 1183 KIHWLSWEKMTLPK 1196