BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035435
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK70635.1|AC091238_13 Putative polyprotein [Oryza sativa Jap...    72   2e-10
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]                66   9e-09
emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]         66   9e-09
gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]      62   2e-07
gb|AAN59764.1| Putative retroelement [Oryza sativa Japonica Grou...    60   4e-07

>gb|AAK70635.1|AC091238_13 Putative polyprotein [Oryza sativa Japonica Group]
           gi|21321751|gb|AAM47286.1|AC122146_5 Putative
           polyprotein [Oryza sativa Japonica Group]
           gi|31430566|gb|AAP52460.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 869

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 35/85 (41%), Positives = 55/85 (64%)
 Frame = -2

Query: 678 EQLVEQFEDVFQEPKELPPFRAQDHNIPLIPGSRLLTKELTGFLLFRRLSSKGKLKRCLL 499
           E+L+++F+ +FQEPK+LPP R  DH IPL+P +R +T +      +R L++         
Sbjct: 288 EELIQEFQSIFQEPKKLPPHRDFDHGIPLVPNARPVTTK-----PYRALNNIN------- 335

Query: 498 QAIKNKYHIPLIDELLDELKSACWF 424
             +KNKY +P+++ELLDEL  + WF
Sbjct: 336 --VKNKYPMPVVNELLDELSGSKWF 358


>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
          Length = 1265

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 36/129 (27%)
 Frame = -2

Query: 699 QKGEEKLEQLVEQFEDVFQEPKELPPFRAQDHNIPLIPGSRLL----------------- 571
           Q     ++ ++++F D+F EP+ LPP R+ DH IPLI G++L+                 
Sbjct: 605 QNVPSSIQSILDEFADIFTEPEGLPPSRSYDHTIPLIAGAQLVNIRPYRYTPDQKNEIEK 664

Query: 570 -TKELTGFLLFRRLSS------------KGKLKRCL----LQA--IKNKYHIPLIDELLD 448
             +E+    + R  SS             G  + C+    L A  IKNKY +P+IDELLD
Sbjct: 665 QVQEMLKKGIIRPSSSPFSSPVLLVKKKDGTWRFCVDYRHLNAITIKNKYPLPVIDELLD 724

Query: 447 ELKSACWFN 421
           EL  ACWF+
Sbjct: 725 ELAGACWFS 733


>emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
          Length = 1575

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 36/129 (27%)
 Frame = -2

Query: 699  QKGEEKLEQLVEQFEDVFQEPKELPPFRAQDHNIPLIPGSRLL----------------- 571
            Q     ++ ++++F D+F EP+ LPP R+ DH IPLI G++L+                 
Sbjct: 656  QNVPSSIQSILDEFADIFTEPEGLPPSRSYDHTIPLIAGAQLVNIRPYRYTPDQKNEIEK 715

Query: 570  -TKELTGFLLFRRLSS------------KGKLKRCL----LQA--IKNKYHIPLIDELLD 448
              +E+    + R  SS             G  + C+    L A  IKNKY +P+IDELLD
Sbjct: 716  QVQEMLKKGIIRPSSSPFSSPVLLVKKKDGTWRFCVDYRHLNAITIKNKYPLPVIDELLD 775

Query: 447  ELKSACWFN 421
            EL  ACWF+
Sbjct: 776  ELAGACWFS 784


>gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1263

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 38/127 (29%)
 Frame = -2

Query: 687  EKLEQLVEQFEDVFQEPKELPPFRAQDHNIPLIPGS-----------------------R 577
            + ++ LV++F  +F+EP  LPP R  DH IPLIPG+                        
Sbjct: 634  DAVQSLVQEFSHLFEEPSGLPPARDYDHTIPLIPGAVPVNVRPYRYTPAQKDEIEKQVKD 693

Query: 576  LLTKEL---------TGFLLFRRLSSKGKLKRCL----LQAI--KNKYHIPLIDELLDEL 442
            +L K +         +  LL ++    G  + C+    L AI  KNKY +P+IDEL+DEL
Sbjct: 694  MLQKGIIQPSASPFSSPVLLVKK--KDGTWRFCVDYRHLNAITVKNKYPLPIIDELMDEL 751

Query: 441  KSACWFN 421
              ACWF+
Sbjct: 752  AGACWFS 758


>gb|AAN59764.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|108706657|gb|ABF94452.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1021

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 44/123 (35%), Positives = 58/123 (47%), Gaps = 36/123 (29%)
 Frame = -2

Query: 684  KLEQLVEQFEDVFQEPKELPPFRAQDHNIPLIPGS------------------RLLTKEL 559
            +++Q++  F  VF EP  LPP RA DH+IPL+PG+                   L  KE+
Sbjct: 671  EIQQVLSNFAHVFDEPSSLPPSRAFDHSIPLMPGALPVNVRPYRYTPTQKDEIELQVKEM 730

Query: 558  TGFLLFRRLSS------------KGKLKRCL----LQA--IKNKYHIPLIDELLDELKSA 433
                  +  SS             G  + C+    L A  IKNKY +P+IDELLDEL  A
Sbjct: 731  LAKGTIQPSSSPFSSPVLLVKKKDGTWRFCVDYRHLNAITIKNKYPLPVIDELLDELSGA 790

Query: 432  CWF 424
             WF
Sbjct: 791  HWF 793