BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035430
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   118   4e-25
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]         85   7e-15
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...    84   2e-14
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]    83   2e-14
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...    83   3e-14

>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/125 (47%), Positives = 82/125 (65%), Gaps = 4/125 (3%)
 Frame = -2

Query: 408 KYACSRWLNFQMTDDKSVLELVHEYEYMCADIVAEGMKICDMFQANCLLGKLPPSWKTYV 229
           KY   +WL FQMTDDK V+E +HEYE +  ++++EGMK+C++ QAN LL K PPSW  Y 
Sbjct: 139 KYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMCEILQANVLLEKFPPSWNDYR 198

Query: 228 NSLKHK*KDFTL*ELVSHIKIEEQNRIQIKGNTLDQHS----LLAASLVESKDAGHKKGQ 61
           N LKHK KD  L EL+SH++ EE NR++ K  + + +S    L+ +S V       +KG 
Sbjct: 199 NHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKGH 258

Query: 60  KGRIS 46
           KG+ S
Sbjct: 259 KGKNS 263


>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/134 (34%), Positives = 74/134 (55%)
 Frame = -2

Query: 408 KYACSRWLNFQMTDDKSVLELVHEYEYMCADIVAEGMKICDMFQANCLLGKLPPSWKTYV 229
           KY  +++L+FQM DDKS+LE VHE + +   + A  + + ++FQ   ++ KLPP WK + 
Sbjct: 115 KYLIAKYLDFQMVDDKSILEQVHELQVLVNKLTALSIPLPEIFQVGVIIAKLPPGWKDFS 174

Query: 228 NSLKHK*KDFTL*ELVSHIKIEEQNRIQIKGNTLDQHSLLAASLVESKDAGHKKGQKGRI 49
             + HK +D++L EL+ H++IEE+ R        D+   + +S+          GQKG+ 
Sbjct: 175 KRMMHKSEDYSLDELLKHLRIEEETR------NRDKRGKVGSSV---NHVAGGSGQKGK- 224

Query: 48  SSHLHGTRQINKKF 7
                G    NKKF
Sbjct: 225 -----GASSRNKKF 233


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
 Frame = -2

Query: 408 KYACSRWLNFQMTDDKSVLELVHEYEYMCADIVAEGMKICDMFQANCLLGKLPPSWKTYV 229
           K+   R+L+++M D K+V+  V E + +  +I AEGM + + FQ   ++ KLPP+WK + 
Sbjct: 141 KFVVGRFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFK 200

Query: 228 NSLKHK*KDFTL*ELVSHIKIEEQNR----------IQIKGNTLDQHSLLAASLVESKDA 79
           N LKHK K+ ++ +L+  ++IEE NR           + K N ++      A    +K  
Sbjct: 201 NCLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNNKGK 260

Query: 78  GHKKGQKGRIS 46
           G K G KG IS
Sbjct: 261 GSKLGPKGGIS 271


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
 Frame = -2

Query: 408 KYACSRWLNFQMTDDKSVLELVHEYEYMCADIVAEGMKICDMFQANCLLGKLPPSWKTYV 229
           K+   R+L+++M D K+V+  V E + +  +I AEGM + + FQ   ++ KLPP+WK + 
Sbjct: 141 KFVVGRFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFK 200

Query: 228 NSLKHK*KDFTL*ELVSHIKIEEQNR----------IQIKGNTLDQHSLLAASLVESKDA 79
           N LKHK K+ ++ +L+  ++IEE NR           + K N ++      A    +K  
Sbjct: 201 NYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGK 260

Query: 78  GHKKGQKGRIS 46
           G K G KG IS
Sbjct: 261 GSKLGPKGGIS 271


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
 Frame = -2

Query: 408 KYACSRWLNFQMTDDKSVLELVHEYEYMCADIVAEGMKICDMFQANCLLGKLPPSWKTYV 229
           K+   R+L+++M D K+V+  V E + +  +I AEGM + + FQ   ++ KLPP+WK + 
Sbjct: 141 KFVVGRFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFK 200

Query: 228 NSLKHK*KDFTL*ELVSHIKIEEQNR----------IQIKGNTLDQHSLLAASLVESKDA 79
           N LKHK K+ ++ +L+  ++IEE NR           + K N ++      A    +K  
Sbjct: 201 NYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSNAKTNNNKGK 260

Query: 78  GHKKGQKGRIS 46
           G K G KG IS
Sbjct: 261 GSKLGPKGGIS 271