BLASTX nr result

ID: Bupleurum21_contig00035367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035367
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252...   112   4e-23
emb|CAN64522.1| hypothetical protein VITISV_043621 [Vitis vinifera]   112   4e-23
ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp....   103   1e-20
emb|CBI23013.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Ar...   101   7e-20

>ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera]
          Length = 1887

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 17/120 (14%)
 Frame = -1

Query: 310  SKSLPISVIDSGKCLSMDTTEWNSQLEKLQQKIPSSIDVLSTSHCEELDAEGSLPFNTIV 131
            S SLPISVIDSGKCL+++++EW  QLEK +QK PS+ID+LS  HC EL+ +G+LP +  V
Sbjct: 701  SLSLPISVIDSGKCLAVESSEWLFQLEKQRQKAPSTIDILSERHCLELEVDGALPVDAPV 760

Query: 130  NAGYALPDEVIAVVRPASF-----------------NMASKYLDQKHIAVTDFDMVLEIK 2
            +AG   P E++AVVRPASF                 N ASK LDQK+I   + ++ +E+K
Sbjct: 761  HAGQVPPKEIVAVVRPASFVSSSASKNLDQKYIIKDNFASKNLDQKYIIKDNLELSMEVK 820


>emb|CAN64522.1| hypothetical protein VITISV_043621 [Vitis vinifera]
          Length = 1459

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 17/120 (14%)
 Frame = -1

Query: 310  SKSLPISVIDSGKCLSMDTTEWNSQLEKLQQKIPSSIDVLSTSHCEELDAEGSLPFNTIV 131
            S SLPISVIDSGKCL+++++EW  QLEK +QK PS+ID+LS  HC EL+ +G+LP +  V
Sbjct: 830  SLSLPISVIDSGKCLAVESSEWLFQLEKQRQKAPSTIDILSERHCLELEVDGALPVDAPV 889

Query: 130  NAGYALPDEVIAVVRPASF-----------------NMASKYLDQKHIAVTDFDMVLEIK 2
            +AG   P E++AVVRPASF                 N ASK LDQK+I   + ++ +E+K
Sbjct: 890  HAGQVPPKEIVAVVRPASFVSSSASKNLDQKYIIKDNFASKNLDQKYIIKDNLELSMEVK 949


>ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320020|gb|EFH50442.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1607

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/108 (50%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
 Frame = -1

Query: 310  SKSLPISVIDSGKCLSMDTTEWNSQLEKLQQKIPSSIDVLSTSHCEELDAEGSLPFNTIV 131
            S SLPI++IDSGKCL +D  EWN +L+K Q+K PS ID+L    C EL  +G LP    V
Sbjct: 690  SLSLPITIIDSGKCLHVDANEWNRKLDKQQEKAPSKIDLLDERDCRELKIDGELPVGDSV 749

Query: 130  NAGYALPDEVIAVVRPASFNMA--SKYLDQKHIAVTDFD---MVLEIK 2
             AG A P +++AVVRPA F  +  SK LDQKHI   D +   MV+ +K
Sbjct: 750  RAGKATPKQIVAVVRPACFTSSTPSKKLDQKHIVKMDGEEMVMVVTLK 797


>emb|CBI23013.3| unnamed protein product [Vitis vinifera]
          Length = 1718

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/96 (56%), Positives = 71/96 (73%), Gaps = 5/96 (5%)
 Frame = -1

Query: 310  SKSLPISVIDSGKCLSMDTTEWNSQLEKLQQKIPSSIDVLSTSHCEELDAEGSLPFNTIV 131
            S SLPISVIDSGKCL+++++EW  QLEK +QK PS+ID+LS  HC EL+ +G+LP +  V
Sbjct: 792  SLSLPISVIDSGKCLAVESSEWLFQLEKQRQKAPSTIDILSERHCLELEVDGALPVDAPV 851

Query: 130  NAGYALPDEVIAVVRPASF-NMASKYL----DQKHI 38
            +AG   P E++AVVRPASF +M  K +    D KHI
Sbjct: 852  HAGQVPPKEIVAVVRPASFLSMEVKLMDGTKDTKHI 887


>ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana]
            gi|332005896|gb|AED93279.1| gamma-irradiation and
            mitomycin c induced 1 [Arabidopsis thaliana]
          Length = 1598

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
 Frame = -1

Query: 310  SKSLPISVIDSGKCLSMDTTEWNSQLEKLQQKIPSSIDVLSTSHCEELDAEGSLPFNTIV 131
            S SLPI++IDSGKCL +D  EWN +L+K Q+K PS ID+L    C EL  +G LP    V
Sbjct: 694  SLSLPITIIDSGKCLPVDANEWNRKLDKQQEKAPSKIDLLDERDCRELKIDGELPIGNSV 753

Query: 130  NAGYALPDEVIAVVRPASFN--MASKYLDQKHIAVTD-FDMVLEIK 2
             AG A P +++AVVRPA F     SK LDQK+I   D  +MV+ +K
Sbjct: 754  RAGKAPPKQIVAVVRPACFTSLTPSKKLDQKNIVKMDGEEMVMVVK 799


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