BLASTX nr result
ID: Bupleurum21_contig00035347
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00035347 (355 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003538789.1| PREDICTED: protein SHORT-ROOT-like [Glycine ... 171 6e-41 ref|XP_003517347.1| PREDICTED: protein SHORT-ROOT-like [Glycine ... 168 5e-40 emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera] 167 8e-40 ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2... 167 1e-39 ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1... 167 1e-39 >ref|XP_003538789.1| PREDICTED: protein SHORT-ROOT-like [Glycine max] Length = 482 Score = 171 bits (433), Expect = 6e-41 Identities = 81/118 (68%), Positives = 98/118 (83%) Frame = +2 Query: 2 ATIQKVMREISYRMEKFARLMGVPFKFNVIHHIGDLSELNSAVLDVQEDEALVINCVGSL 181 AT QKVM+EI RMEKFARLMGVPFKFNV+HH+G LS+L+ +VLD++EDEAL INCV +L Sbjct: 256 ATAQKVMKEIGARMEKFARLMGVPFKFNVVHHVGQLSDLDFSVLDIKEDEALAINCVNTL 315 Query: 182 HSIKKENDRRNVFLTMLSRLRPSIVTVVEEEADLDVGADGDEFVKGSEECLKWFRVYF 355 HSI + R+ ++ L RL+P IVTVVEEEADLD+G +G EFVKG EECL+WFRVYF Sbjct: 316 HSIAAVGNHRDAVISSLRRLKPRIVTVVEEEADLDIGLEGFEFVKGFEECLRWFRVYF 373 >ref|XP_003517347.1| PREDICTED: protein SHORT-ROOT-like [Glycine max] Length = 476 Score = 168 bits (425), Expect = 5e-40 Identities = 79/118 (66%), Positives = 98/118 (83%) Frame = +2 Query: 2 ATIQKVMREISYRMEKFARLMGVPFKFNVIHHIGDLSELNSAVLDVQEDEALVINCVGSL 181 AT QK+M+EI RMEKFARLMGVPFKFNV+HH+G LS+L+ ++LD++EDEAL INCV +L Sbjct: 251 ATAQKLMKEIGARMEKFARLMGVPFKFNVVHHVGQLSDLDFSMLDIKEDEALAINCVNTL 310 Query: 182 HSIKKENDRRNVFLTMLSRLRPSIVTVVEEEADLDVGADGDEFVKGSEECLKWFRVYF 355 HSI + R+ ++ L RL+P IVT+VEEEADLDVG +G EFVKG EECL+WFRVYF Sbjct: 311 HSIAAVGNHRDAVISSLRRLKPRIVTLVEEEADLDVGLEGFEFVKGFEECLRWFRVYF 368 >emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera] Length = 480 Score = 167 bits (423), Expect = 8e-40 Identities = 77/117 (65%), Positives = 96/117 (82%) Frame = +2 Query: 2 ATIQKVMREISYRMEKFARLMGVPFKFNVIHHIGDLSELNSAVLDVQEDEALVINCVGSL 181 A +QK+M+EI RMEKFARLMGVPFKFNV+HH GDLS LN A LD+++DEAL +NCVG+L Sbjct: 257 APVQKLMKEIGNRMEKFARLMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGAL 316 Query: 182 HSIKKENDRRNVFLTMLSRLRPSIVTVVEEEADLDVGADGDEFVKGSEECLKWFRVY 352 HS+ +RR++ ++ RL P I+TVVEEEADLDVG DG +FVKG +ECL+WFRVY Sbjct: 317 HSVTAVGNRRDIVVSSFRRLHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVY 373 >ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2 [Vitis vinifera] Length = 509 Score = 167 bits (422), Expect = 1e-39 Identities = 77/117 (65%), Positives = 96/117 (82%) Frame = +2 Query: 2 ATIQKVMREISYRMEKFARLMGVPFKFNVIHHIGDLSELNSAVLDVQEDEALVINCVGSL 181 A +QK+M+EI RMEKFARLMGVPFKFNV+HH GDLS LN A LD+++DEAL +NCVG+L Sbjct: 286 APVQKLMKEIGNRMEKFARLMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGAL 345 Query: 182 HSIKKENDRRNVFLTMLSRLRPSIVTVVEEEADLDVGADGDEFVKGSEECLKWFRVY 352 HS+ +RR++ ++ RL P I+TVVEEEADLDVG DG +FVKG +ECL+WFRVY Sbjct: 346 HSVTAFGNRRDIVVSSFRRLHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVY 402 >ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1 [Vitis vinifera] Length = 494 Score = 167 bits (422), Expect = 1e-39 Identities = 77/117 (65%), Positives = 96/117 (82%) Frame = +2 Query: 2 ATIQKVMREISYRMEKFARLMGVPFKFNVIHHIGDLSELNSAVLDVQEDEALVINCVGSL 181 A +QK+M+EI RMEKFARLMGVPFKFNV+HH GDLS LN A LD+++DEAL +NCVG+L Sbjct: 271 APVQKLMKEIGNRMEKFARLMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGAL 330 Query: 182 HSIKKENDRRNVFLTMLSRLRPSIVTVVEEEADLDVGADGDEFVKGSEECLKWFRVY 352 HS+ +RR++ ++ RL P I+TVVEEEADLDVG DG +FVKG +ECL+WFRVY Sbjct: 331 HSVTAFGNRRDIVVSSFRRLHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVY 387