BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035324
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]   119   2e-25
ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ...    89   4e-16
ref|NP_680777.2| pentatricopeptide repeat-containing protein [Ar...    85   5e-15

>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/96 (58%), Positives = 72/96 (75%)
 Frame = +3

Query: 6   IIKEHYEIDQMIHNALLSMYCKFGLVALAEKFVDVIHERDDEVWNLMVQGYSKAGLPSKC 185
           II+ HY +DQM+ NALLSMYCKFG + LAEKF   ++E++ E WNLMV GY K GL  KC
Sbjct: 694 IIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKC 753

Query: 186 IEFFREMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
           I  FREM+ + I+S  N+LV+V+SSCS+LGA +  R
Sbjct: 754 IGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLAR 789



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/91 (31%), Positives = 50/91 (54%)
 Frame = +3

Query: 21   YEIDQMIHNALLSMYCKFGLVALAEKFVDVIHERDDEVWNLMVQGYSKAGLPSKCIEFFR 200
            +E +  I  AL+ MY K G +  + +  + +HERD   WN+M+ GY   G     IE F+
Sbjct: 900  FEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQ 959

Query: 201  EMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
            +M     + +  T +AV+S+C+  G + +G+
Sbjct: 960  QMEESSAKPNGLTFLAVLSACAHAGLVKEGK 990


>ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/96 (46%), Positives = 61/96 (63%)
 Frame = +3

Query: 6   IIKEHYEIDQMIHNALLSMYCKFGLVALAEKFVDVIHERDDEVWNLMVQGYSKAGLPSKC 185
           I+K+   +  + HNALLSMYCKFG +  A K     H+  ++ W+ M+ GYS  G   KC
Sbjct: 337 ILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSED-WSTMILGYSNMGQKEKC 395

Query: 186 IEFFREMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
           I F REM L+  +   N+LV+VISSCS++GAI  GR
Sbjct: 396 ISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGR 431



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = +3

Query: 9   IKEH-YEIDQMIHNALLSMYCKFGLVALAEKFVDVIHERDDEVWNLMVQGYSKAGLPSKC 185
           IKE+ +E +  I  AL+ MY K G +  + K  +   ERD  +WN+M+  Y   G     
Sbjct: 538 IKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESA 597

Query: 186 IEFFREMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
           +E F+ M   +I+ +  T ++++S+C+  G + +GR
Sbjct: 598 MEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGR 633


>ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/96 (46%), Positives = 61/96 (63%)
 Frame = +3

Query: 6   IIKEHYEIDQMIHNALLSMYCKFGLVALAEKFVDVIHERDDEVWNLMVQGYSKAGLPSKC 185
           I+K+   +  + HNALLSMYCKFG +  A K     H+  ++ W+ M+ GYS  G   KC
Sbjct: 367 ILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSED-WSTMILGYSNMGQKEKC 425

Query: 186 IEFFREMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
           I F REM L+  +   N+LV+VISSCS++GAI  GR
Sbjct: 426 ISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGR 461



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = +3

Query: 9   IKEH-YEIDQMIHNALLSMYCKFGLVALAEKFVDVIHERDDEVWNLMVQGYSKAGLPSKC 185
           IKE+ +E +  I  AL+ MY K G +  + K  +   ERD  +WN+M+  Y   G     
Sbjct: 568 IKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESA 627

Query: 186 IEFFREMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
           +E F+ M   +I+ +  T ++++S+C+  G + +GR
Sbjct: 628 MEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGR 663


>ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519010|gb|AET00634.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/96 (44%), Positives = 62/96 (64%)
 Frame = +3

Query: 6   IIKEHYEIDQMIHNALLSMYCKFGLVALAEKFVDVIHERDDEVWNLMVQGYSKAGLPSKC 185
           II+ HY  D+M+ N+LLSMYCKFG+++ AE+      +   E WN M+ GY + G   KC
Sbjct: 341 IIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIVGYGRIGKNVKC 399

Query: 186 IEFFREMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
           I+ FREM+ + I+S    +V+ I+SC +LG I  GR
Sbjct: 400 IQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGR 435



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/97 (25%), Positives = 53/97 (54%)
 Frame = +3

Query: 3   FIIKEHYEIDQMIHNALLSMYCKFGLVALAEKFVDVIHERDDEVWNLMVQGYSKAGLPSK 182
           +I ++ ++++  +  AL+ MY K G +  + +  D + E+D   WN M+ GY   G    
Sbjct: 540 YINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAES 599

Query: 183 CIEFFREMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
            IE F  M   +++ +  T ++++S+C+  G + +G+
Sbjct: 600 AIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGK 636


>ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
           gi|332661744|gb|AEE87144.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   FIIKEHYEIDQMIHNALLSMYCKFGLVALAEK-FVDVIHERDDEVWNLMVQGYSKAGLPS 179
           F+I+  + +D  + N+LLSMYCKF L+++AEK F  +  E + E WN M++GY K     
Sbjct: 356 FVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV 415

Query: 180 KCIEFFREMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
           KCIE FR+++ + I+    +  +VISSCS +GA+  G+
Sbjct: 416 KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGK 453



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/97 (27%), Positives = 53/97 (54%)
 Frame = +3

Query: 3   FIIKEHYEIDQMIHNALLSMYCKFGLVALAEKFVDVIHERDDEVWNLMVQGYSKAGLPSK 182
           +I +  +E++  +  AL+ MY K G +  + +  D  +++D   WN+M+ GY   G    
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVES 617

Query: 183 CIEFFREMRLVDIQSSFNTLVAVISSCSELGAIYQGR 293
            I  F +M   D++ +  T +A++S+C+  G + QG+
Sbjct: 618 AIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGK 654