BLASTX nr result

ID: Bupleurum21_contig00035318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035318
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    73   3e-11
ref|XP_003636511.1| hypothetical protein MTR_043s0014 [Medicago ...    70   2e-10
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    66   3e-09
ref|XP_003596957.1| hypothetical protein MTR_2g088070 [Medicago ...    65   9e-09
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    63   3e-08

>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/98 (33%), Positives = 57/98 (58%)
 Frame = +2

Query: 236 VGVQEVLQWVCEMGVTQVVVESDSLTVVNALCKNTQYVSDVGSIFECCRTVLRQRRDLRV 415
           +G++E +QWV  +G + V+ E D+  VV+A+      + + G++   CR +L+   +  V
Sbjct: 224 IGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSV 283

Query: 416 QHVRRQANRVAHSIAKLPCMSGTMNWFITPPSCVSELI 529
           Q +R+QAN VAHS+A+   +    N F  PP C+  L+
Sbjct: 284 QFIRKQANLVAHSLARASHLQDGFNMFSVPPDCIRNLV 321


>ref|XP_003636511.1| hypothetical protein MTR_043s0014 [Medicago truncatula]
           gi|355502446|gb|AES83649.1| hypothetical protein
           MTR_043s0014 [Medicago truncatula]
          Length = 132

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/101 (30%), Positives = 64/101 (63%)
 Frame = +2

Query: 236 VGVQEVLQWVCEMGVTQVVVESDSLTVVNALCKNTQYVSDVGSIFECCRTVLRQRRDLRV 415
           +G+++ + W+ E+G++ V +E D   VV+++ +N+   SD G+I   CR++L Q R+ ++
Sbjct: 30  LGLKDTIVWLGELGLSMVQIELDCKLVVDSIMENSNNQSDFGNIISSCRSLLNQFRNFKI 89

Query: 416 QHVRRQANRVAHSIAKLPCMSGTMNWFITPPSCVSELIVSD 538
             VRRQAN VAH++ +   +    + +   PS +S +++++
Sbjct: 90  SFVRRQANYVAHTLTRALKLDACHHIYDLIPSYISSILINE 130


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
 Frame = +2

Query: 236  VGVQEVLQWVCEMGVTQVVVESDSLTVVNAL----CKNTQYVSDVGSIFECCRTVLRQRR 403
            +GV+EVL W+ E   +++VVE+D L VV A+    C NT +    G I   C  VL+   
Sbjct: 718  LGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSF----GFIIVDCLDVLQHLV 773

Query: 404  DLRVQHVRRQANRVAHSIAKLPCMSGTMN-WFITPPSCV 517
            D++V + RR AN  AH +A   C   +++ W  TPP C+
Sbjct: 774  DVQVVYARRSANSAAHCLANGACSFTSLHIWGYTPPQCI 812


>ref|XP_003596957.1| hypothetical protein MTR_2g088070 [Medicago truncatula]
           gi|355486005|gb|AES67208.1| hypothetical protein
           MTR_2g088070 [Medicago truncatula]
          Length = 327

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 33/92 (35%), Positives = 50/92 (54%)
 Frame = +2

Query: 233 VVGVQEVLQWVCEMGVTQVVVESDSLTVVNALCKNTQYVSDVGSIFECCRTVLRQRRDLR 412
           V  +QE LQ   E+ + +VV E D   VV  L  N+ YV + G++   CRT+L       
Sbjct: 235 VTALQEALQIALELCLNRVVFEPDCYIVVTTLLNNSSYVYEQGNLLSNCRTLLISNASYD 294

Query: 413 VQHVRRQANRVAHSIAKLPCMSGTMNWFITPP 508
             ++RRQANRVAH++ +   +  + + F  PP
Sbjct: 295 PAYIRRQANRVAHNLTRASRLHASRSTFFHPP 326


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = +2

Query: 236  VGVQEVLQWVCEMGVTQVVVESDSLTVVNALCKNTQYVSDVGSIFECCRTVLRQR-RDLR 412
            +G+   ++W  E  +  +  E DS  VV +       VSD+G+I   CRT       + R
Sbjct: 1620 IGLLYAIRWAKEQNLNNITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFTNSR 1679

Query: 413  VQHVRRQANRVAHSIAKLPCMSGTMNWFITPPSCVSELIVSD 538
            V+ +RRQAN V HS+A+      ++++F   P C+ ++++++
Sbjct: 1680 VEFIRRQANEVVHSLARAATFYASIHYFTVLPDCIQDVLINE 1721


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