BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035288
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           107   1e-21
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   107   1e-21
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       105   4e-21
ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A...   101   7e-20
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/129 (37%), Positives = 69/129 (53%)
 Frame = -3

Query: 481  FWSMFLFLPKGVLNQIKSIFCKFLWGGSLASSPHFKVSWATCCLPIAEGGLGIRDVSSWN 302
            FW     LPKG + +I+S+  KFLW GS+      KVSW  CCLP +EGGLG R    WN
Sbjct: 677  FWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWN 736

Query: 301  NAAILFHLWRIVCSHKSLWVDWFKACIIKSRSFWEIKIPNAAPWCVRRILSSRPQALHYI 122
               +L  +W +     SLW  W +   +   SFW++      PW  + +L+ RP A  +I
Sbjct: 737  KTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFI 796

Query: 121  RYQVGSNSS 95
            + +VG+  +
Sbjct: 797  KAKVGNGGT 805


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/129 (37%), Positives = 69/129 (53%)
 Frame = -3

Query: 481  FWSMFLFLPKGVLNQIKSIFCKFLWGGSLASSPHFKVSWATCCLPIAEGGLGIRDVSSWN 302
            FW     LPKG + +I+S+  KFLW GS+      KVSW  CCLP +EGGLG R    WN
Sbjct: 677  FWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWN 736

Query: 301  NAAILFHLWRIVCSHKSLWVDWFKACIIKSRSFWEIKIPNAAPWCVRRILSSRPQALHYI 122
               +L  +W +     SLW  W +   +   SFW++      PW  + +L+ RP A  +I
Sbjct: 737  KTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFI 796

Query: 121  RYQVGSNSS 95
            + +VG+  +
Sbjct: 797  KAKVGNGGT 805


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/126 (37%), Positives = 72/126 (57%)
 Frame = -3

Query: 481  FWSMFLFLPKGVLNQIKSIFCKFLWGGSLASSPHFKVSWATCCLPIAEGGLGIRDVSSWN 302
            FW     LPKG + +I+S+  +FLW G++  +   KVSWA  CLP +EGGLG+R +  WN
Sbjct: 817  FWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWN 876

Query: 301  NAAILFHLWRIVCSHKSLWVDWFKACIIKSRSFWEIKIPNAAPWCVRRILSSRPQALHYI 122
                +  +WR+  +  SLW DW     +   SFW ++   +  W  +R+LS RP A  ++
Sbjct: 877  KTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFL 936

Query: 121  RYQVGS 104
              +VG+
Sbjct: 937  VCKVGN 942


>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 265

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/134 (38%), Positives = 67/134 (50%)
 Frame = -3

Query: 487 QGFWSMFLFLPKGVLNQIKSIFCKFLWGGSLASSPHFKVSWATCCLPIAEGGLGIRDVSS 308
           Q +W+    LP  V   +  I   + W G        KV+W   CLP  EGGL IRD SS
Sbjct: 92  QVYWASVFMLPMKVHRDVNKILRSYFWRGKEEGRGGDKVAWDEVCLPFDEGGLVIRDRSS 151

Query: 307 WNNAAILFHLWRIVCSHKSLWVDWFKACIIKSRSFWEIKIPNAAPWCVRRILSSRPQALH 128
           WN A+ L  LW ++    SLWV W +A I+K RS WEI +     WC R IL  R     
Sbjct: 152 WNIASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEIDVGVGRSWCFRAILRKREILEA 211

Query: 127 YIRYQVGSNSSDRI 86
           ++  +VG+    R+
Sbjct: 212 HVNIEVGNGKKCRV 225


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  100 bits (250), Expect = 1e-19
 Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
 Frame = -3

Query: 487 QGFWSMFLFLPKGVLNQIKSIFCKFLWGGSLASSPHFKVSWATCCLPIAEGGLGIRDVSS 308
           Q +W+    LP  V+  ++ I   FLW GS   +   KV+W   CLP  EGGLGI+ +  
Sbjct: 109 QVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKE 168

Query: 307 WNNAAILFHLWRIV-CSHKSLWVDWFKACIIKSRSFWEIKIPNAAPWCVRRILSSRPQAL 131
           WN  A+L H+W +   S  S+W  W ++ +++ R+FW IK P    W   +IL  R  A 
Sbjct: 169 WNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAW 228

Query: 130 HYIRYQVG 107
             ++Y +G
Sbjct: 229 PKMKYIIG 236