BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035273
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotei...   151   6e-35
ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arab...   149   4e-34
ref|XP_004137370.1| PREDICTED: U2 small nuclear ribonucleoprotei...   148   5e-34
ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycin...   146   2e-33
ref|NP_180585.1| U2 small nuclear ribonucleoprotein B'' [Arabido...   144   9e-33

>ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
           gi|297745807|emb|CBI15863.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  151 bits (382), Expect = 6e-35
 Identities = 80/131 (61%), Positives = 96/131 (73%), Gaps = 4/131 (3%)
 Frame = -2

Query: 434 QTIYIXXXXXXXXXXXXKRSLYALFSQFGRILDIVALKSPELRGQAWVVFSEVTAASNAV 255
           Q+IYI            KRSLY LFSQ+GRILD+VALK+P+LRGQAWVVFSEVTAASNAV
Sbjct: 10  QSIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVVFSEVTAASNAV 69

Query: 254 QQMQNFLFCDKPMHIQYAKSKSDSVAKADGSLVPKDVEKKQEVEAERKKQESPA----GT 87
           +QMQNF F DKPM +QYAK+KSD VAKADG+ VP++ +KKQE +AE+K++   A      
Sbjct: 70  RQMQNFPFYDKPMRVQYAKTKSDCVAKADGTFVPREKKKKQEEKAEKKRRAEEAQQSGNA 129

Query: 86  TGLRAETKANP 54
            G  AET   P
Sbjct: 130 NGRNAETNGGP 140


>ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
           lyrata] gi|297326934|gb|EFH57354.1| hypothetical protein
           ARALYDRAFT_320780 [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score =  149 bits (375), Expect = 4e-34
 Identities = 76/117 (64%), Positives = 91/117 (77%)
 Frame = -2

Query: 434 QTIYIXXXXXXXXXXXXKRSLYALFSQFGRILDIVALKSPELRGQAWVVFSEVTAASNAV 255
           Q+IYI            KRSLY LFSQFGRILD+VALK+P+LRGQAWV FSEVTAASNAV
Sbjct: 10  QSIYIQNLNEKIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVTFSEVTAASNAV 69

Query: 254 QQMQNFLFCDKPMHIQYAKSKSDSVAKADGSLVPKDVEKKQEVEAERKKQESPAGTT 84
           +QMQNF F DKPM +QYAK+KSD +AKA+G+ VPKD ++KQE + ERK++ES    T
Sbjct: 70  RQMQNFPFYDKPMRLQYAKAKSDCLAKAEGTFVPKDKKRKQEEKVERKREESQRPNT 126


>ref|XP_004137370.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
           sativus] gi|449520549|ref|XP_004167296.1| PREDICTED: U2
           small nuclear ribonucleoprotein B'' 2-like [Cucumis
           sativus]
          Length = 231

 Score =  148 bits (374), Expect = 5e-34
 Identities = 79/124 (63%), Positives = 93/124 (75%), Gaps = 7/124 (5%)
 Frame = -2

Query: 434 QTIYIXXXXXXXXXXXXKRSLYALFSQFGRILDIVALKSPELRGQAWVVFSEVTAASNAV 255
           QTIYI            KRSLYALFSQ+GRILD+VALK+P LRGQAWV FSEVTAASNAV
Sbjct: 10  QTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAV 69

Query: 254 QQMQNFLFCDKPMHIQYAKSKSDSVAKADGSLVPKDVEKKQEVEAERKKQES-------P 96
           +QMQNF F +KPM IQYAK+KSD +AKADGS VP++ +KKQE +AE+K++         P
Sbjct: 70  RQMQNFPFYEKPMRIQYAKTKSDCIAKADGSFVPREKKKKQEEKAEKKRRAEETHQSAMP 129

Query: 95  AGTT 84
            GTT
Sbjct: 130 NGTT 133


>ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
           gi|255647802|gb|ACU24361.1| unknown [Glycine max]
          Length = 232

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/119 (62%), Positives = 92/119 (77%)
 Frame = -2

Query: 434 QTIYIXXXXXXXXXXXXKRSLYALFSQFGRILDIVALKSPELRGQAWVVFSEVTAASNAV 255
           QTIYI            KRSLY LFSQ+GRILD++ALK+P+LRGQAWV FSEVTAASNAV
Sbjct: 10  QTIYIKNINEKVKKDELKRSLYCLFSQYGRILDVIALKTPKLRGQAWVCFSEVTAASNAV 69

Query: 254 QQMQNFLFCDKPMHIQYAKSKSDSVAKADGSLVPKDVEKKQEVEAERKKQESPAGTTGL 78
           +QMQNF F DKPM IQYAK+KSD +AK +G+ VP++ +KKQE +AERK++   A  +G+
Sbjct: 70  RQMQNFPFYDKPMRIQYAKTKSDCIAKEEGTYVPREKKKKQEEKAERKRRAEEAQQSGV 128


>ref|NP_180585.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
           gi|75318049|sp|O22922.1|RU2B1_ARATH RecName: Full=U2
           small nuclear ribonucleoprotein B''; Short=U2 snRNP B''
           gi|2347192|gb|AAC16931.1| putative small nuclear
           ribonucleoprotein U2B [Arabidopsis thaliana]
           gi|27765024|gb|AAO23633.1| At2g30260 [Arabidopsis
           thaliana] gi|110743428|dbj|BAE99600.1| putative small
           nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
           gi|330253269|gb|AEC08363.1| U2 small nuclear
           ribonucleoprotein B'' [Arabidopsis thaliana]
          Length = 232

 Score =  144 bits (363), Expect = 9e-33
 Identities = 73/117 (62%), Positives = 90/117 (76%)
 Frame = -2

Query: 434 QTIYIXXXXXXXXXXXXKRSLYALFSQFGRILDIVALKSPELRGQAWVVFSEVTAASNAV 255
           Q+IYI            KRSLY LFSQFGRILD+VALK+P+LRGQAWV FSEVTAA +AV
Sbjct: 10  QSIYIQNLNERIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVTFSEVTAAGHAV 69

Query: 254 QQMQNFLFCDKPMHIQYAKSKSDSVAKADGSLVPKDVEKKQEVEAERKKQESPAGTT 84
           +QMQNF F DKPM +QYAK+KSD +AKA+G+ VPKD ++KQE + ERK+++S    T
Sbjct: 70  RQMQNFPFYDKPMRLQYAKAKSDCLAKAEGTFVPKDKKRKQEEKVERKREDSQRPNT 126