BLASTX nr result

ID: Bupleurum21_contig00035256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035256
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22145.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002266562.1| PREDICTED: uncharacterized protein LOC100260...    99   5e-19
emb|CAN82555.1| hypothetical protein VITISV_040048 [Vitis vinifera]    98   6e-19
ref|XP_002509619.1| conserved hypothetical protein [Ricinus comm...    98   8e-19
ref|XP_002303534.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17

>emb|CBI22145.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 63/137 (45%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 415 PHSFTPIMECDREGNEDEESQSFKTTPTDELLFSNNNTIINETKYNHQPTPLHQTSKTKG 236
           PH FTPI EC+RE  EDE + S  T   D                 H PTP+H++ K  G
Sbjct: 27  PH-FTPIQECEREEQEDEVTPSSCTDKGDPS--------------KHHPTPIHKSDKN-G 70

Query: 235 KASSRKLXXXXXXXXXXXXXXXXXGVSCNKCRPSNRDKFSVVPLENNGINRH--SLTSPN 62
           K S+RK                   VSCNKCRPS R+K SVVPL+N G+NR+  SL SPN
Sbjct: 71  KQSTRK------RTDSDSLYEDDRTVSCNKCRPSAREKISVVPLDNAGMNRNSSSLASPN 124

Query: 61  GIFKSIFGSLVKKSPIT 11
           GIFKSI  S  +KSP T
Sbjct: 125 GIFKSILSSFTRKSPRT 141


>ref|XP_002266562.1| PREDICTED: uncharacterized protein LOC100260132 [Vitis vinifera]
          Length = 480

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 63/137 (45%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 415 PHSFTPIMECDREGNEDEESQSFKTTPTDELLFSNNNTIINETKYNHQPTPLHQTSKTKG 236
           PH FTPI EC+RE  EDE + S  T   D                 H PTP+H++ K  G
Sbjct: 27  PH-FTPIQECEREEQEDEVTPSSCTDKGDPS--------------KHHPTPIHKSDKN-G 70

Query: 235 KASSRKLXXXXXXXXXXXXXXXXXGVSCNKCRPSNRDKFSVVPLENNGINRH--SLTSPN 62
           K S+RK                   VSCNKCRPS R+K SVVPL+N G+NR+  SL SPN
Sbjct: 71  KQSTRK------RTDSDSLYEDDRTVSCNKCRPSAREKISVVPLDNAGMNRNSSSLASPN 124

Query: 61  GIFKSIFGSLVKKSPIT 11
           GIFKSI  S  +KSP T
Sbjct: 125 GIFKSILSSFTRKSPRT 141


>emb|CAN82555.1| hypothetical protein VITISV_040048 [Vitis vinifera]
          Length = 589

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 63/137 (45%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 415 PHSFTPIMECDREGNEDEESQSFKTTPTDELLFSNNNTIINETKYNHQPTPLHQTSKTKG 236
           PH FTPI EC+RE  EDE + S  T   D                 H PTP+H++ K  G
Sbjct: 27  PH-FTPIQECEREEQEDEVTPSSCTDKGDPS--------------KHHPTPIHKSDKN-G 70

Query: 235 KASSRKLXXXXXXXXXXXXXXXXXGVSCNKCRPSNRDKFSVVPLENNGINRH--SLTSPN 62
           K S+RK                   VSCNKCRPS R+K SVVPL+N G+NR+  SL SPN
Sbjct: 71  KQSTRK------RTDSDSLYEDDRTVSCNKCRPSAREKISVVPLDNAGMNRNSSSLXSPN 124

Query: 61  GIFKSIFGSLVKKSPIT 11
           GIFKSI  S  +KSP T
Sbjct: 125 GIFKSILSSFTRKSPRT 141


>ref|XP_002509619.1| conserved hypothetical protein [Ricinus communis]
           gi|223549518|gb|EEF51006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 481

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
 Frame = -1

Query: 415 PHSFTPIMECDREGNEDEE-SQSFKTTPTDELLFSNNNTIINETKYNHQPTPLHQTSKTK 239
           PH FTPI EC+    EDEE +Q+  TTP      + ++++       HQPTPLH  +   
Sbjct: 15  PH-FTPIQECEEREQEDEERNQNMATTPKP----TPSSSVDKRETPKHQPTPLHVKN--- 66

Query: 238 GKASSRKLXXXXXXXXXXXXXXXXXGVSCNKCRPSNRDKFSVVPLENNGINRHS--LTSP 65
           GK + +K                   VSCNKCRP +R+K SVVPL+ NG+N++S  + SP
Sbjct: 67  GKTNFKK------RHDNCSGEEEDGSVSCNKCRPHSREKISVVPLDTNGLNKNSSFIASP 120

Query: 64  NGIFKSIFGSLVKKSP 17
           NG+FKS+F SL +KSP
Sbjct: 121 NGLFKSLFSSLTRKSP 136


>ref|XP_002303534.1| predicted protein [Populus trichocarpa] gi|222840966|gb|EEE78513.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 58/139 (41%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
 Frame = -1

Query: 415 PHSFTPIMECDREGNEDEESQSFKTTPTDELLFSNNNTIINETKYNHQPTPLHQTSKTKG 236
           PH  TPI EC+RE   DE S+    T T +   +  N I       H PTPL + +  K 
Sbjct: 30  PH-ITPIQECEREEQYDEFSEEGSQTTTSKA--TPVNFIDKRATPKHHPTPLREKNG-KP 85

Query: 235 KASSRKLXXXXXXXXXXXXXXXXXGVSCNKCRPSNRDKFSVVPLENNGINRH-SLTSPNG 59
            A  R                    +SCNKCRP  R+K SVVPL+ NG+N+H S+ SPN 
Sbjct: 86  SAKKRHGDSNDRDGGGGGGGGGGGSISCNKCRPHAREKISVVPLDTNGLNKHSSIASPNW 145

Query: 58  IFKSIFGSLVKKSPITFSD 2
           IFKSIF SL +KSP +  D
Sbjct: 146 IFKSIFSSLTRKSPKSTGD 164


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