BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035232
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ...    89   3e-16
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp....    65   4e-09
dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]            65   6e-09
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th...    65   6e-09

>ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 634

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/108 (62%), Positives = 84/108 (77%)
 Frame = +1

Query: 61  LSGRILKPHLLQIHAKVLVLGAHQDNLVATRLIGHYPSQLALSVFYCLHSPNIYPYNAII 240
           L G I + HLLQIHA++  LGAHQDNL+ATRLIGHYPS+ AL VF+ L +PNI+P+NAII
Sbjct: 43  LQGNIPRSHLLQIHARIFYLGAHQDNLIATRLIGHYPSRAALRVFHHLQNPNIFPFNAII 102

Query: 241 RLLAEEGHFSSAFLIFKRMNFVSLLPNDLTFSFLFKACFRASDVIYIK 384
           R+LA++GHF  A  +F  +   SL PNDLTFSFLFK CFR  DV Y++
Sbjct: 103 RVLAQDGHFFHALSVFNYLKRRSLSPNDLTFSFLFKPCFRTKDVRYVE 150


>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508818|gb|AES89960.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 871

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/69 (59%), Positives = 52/69 (75%)
 Frame = +1

Query: 61  LSGRILKPHLLQIHAKVLVLGAHQDNLVATRLIGHYPSQLALSVFYCLHSPNIYPYNAII 240
           L G +  PHLLQIHA +   GAHQ NL+ATRLIGHY SQ+ L VF+ LH+PN +P+N II
Sbjct: 730 LQGHLSLPHLLQIHAHIFQFGAHQHNLIATRLIGHYISQIDLCVFHQLHNPNNFPFNDII 789

Query: 241 RLLAEEGHF 267
           R LA++ +F
Sbjct: 790 RFLAQKAYF 798


>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330765|gb|EFH61184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
 Frame = +1

Query: 79  KPHLLQIHAKVLVLGAHQDNLVATRLIGHYPSQ----LALSVFYCLHSPNIYPYNAIIRL 246
           K  L QIHA++LVLG      + T+LI    S      A  VF  L  P ++P+NAIIR 
Sbjct: 34  KAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRG 93

Query: 247 LAEEGHFSSAFLIFKRMNFVSLLPNDLTFSFLFKAC 354
            +   HF  A L++ +M    + P+  TF  L KAC
Sbjct: 94  YSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKAC 129


>dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
 Frame = +1

Query: 79  KPHLLQIHAKVLVLGAHQDNLVATRLIGHYPS----QLALSVFYCLHSPNIYPYNAIIRL 246
           K  L QIHA++LVLG      + T+LI    S      A  VF  L  P I+P+NAIIR 
Sbjct: 34  KAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93

Query: 247 LAEEGHFSSAFLIFKRMNFVSLLPNDLTFSFLFKAC 354
            +   HF  A L++  M    + P+  TF  L KAC
Sbjct: 94  YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129


>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
           gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332641723|gb|AEE75244.1| mitochondrial editing factor
           22 [Arabidopsis thaliana]
          Length = 694

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
 Frame = +1

Query: 79  KPHLLQIHAKVLVLGAHQDNLVATRLIGHYPS----QLALSVFYCLHSPNIYPYNAIIRL 246
           K  L QIHA++LVLG      + T+LI    S      A  VF  L  P I+P+NAIIR 
Sbjct: 34  KAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93

Query: 247 LAEEGHFSSAFLIFKRMNFVSLLPNDLTFSFLFKAC 354
            +   HF  A L++  M    + P+  TF  L KAC
Sbjct: 94  YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129