BLASTX nr result

ID: Bupleurum21_contig00035221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035221
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]   181   4e-44
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]   181   6e-44
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   178   5e-43
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]   178   5e-43
emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]   176   1e-42

>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
          Length = 1371

 Score =  181 bits (460), Expect = 4e-44
 Identities = 83/131 (63%), Positives = 111/131 (84%)
 Frame = -2

Query: 396  LVSAPVLALPDFSKKFIVETDASQGGIGAVLVQQGHPLAYISRALGPRWSNLSVYEKELL 217
            +++APVLALP+FSK+FI+ETDAS  GIGAVL+Q+GHP+AYIS+AL  R+  LS YEKE+L
Sbjct: 859  MITAPVLALPNFSKEFIIETDASGQGIGAVLMQEGHPIAYISKALSDRFQTLSTYEKEML 918

Query: 216  AIVFAVQKWEQYLISTHFIIRTDQKSLKWLLEQNVSTPFQQFWLSKLLGFDYEIQYNKGI 37
            AI+ A++KWE YL+  HF+I+TD +SLK+LLEQ V+TP QQ W++KL+ +DYEI+Y +G 
Sbjct: 919  AILMAIKKWESYLVDRHFVIKTDHQSLKYLLEQRVTTPTQQAWVAKLMQYDYEIRYKQGK 978

Query: 36   NNAAADALSRV 4
             N AADALSR+
Sbjct: 979  ENVAADALSRI 989


>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score =  181 bits (459), Expect = 6e-44
 Identities = 83/131 (63%), Positives = 110/131 (83%)
 Frame = -2

Query: 396  LVSAPVLALPDFSKKFIVETDASQGGIGAVLVQQGHPLAYISRALGPRWSNLSVYEKELL 217
            +++APVLALP+FSK+FI+ETDAS  GIGAVL+Q+GHP+AYIS+AL  R+  LS YEKE+L
Sbjct: 842  MITAPVLALPNFSKEFIIETDASGQGIGAVLMQEGHPIAYISKALSDRFQTLSTYEKEML 901

Query: 216  AIVFAVQKWEQYLISTHFIIRTDQKSLKWLLEQNVSTPFQQFWLSKLLGFDYEIQYNKGI 37
            AI+ A++KWE YL+  HF+I+TD +SLK+LLEQ V+TP QQ W++KL+ +DYEI Y +G 
Sbjct: 902  AILMAIKKWESYLVDRHFVIKTDHQSLKYLLEQRVTTPTQQAWVAKLMQYDYEISYKQGK 961

Query: 36   NNAAADALSRV 4
             N AADALSR+
Sbjct: 962  ENVAADALSRI 972


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/131 (66%), Positives = 106/131 (80%)
 Frame = -2

Query: 396  LVSAPVLALPDFSKKFIVETDASQGGIGAVLVQQGHPLAYISRALGPRWSNLSVYEKELL 217
            L  APVL+LP F K+F+VETDA   GIGAVL+Q+GHPLAYISR L  +  +LS+YEKELL
Sbjct: 881  LCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELL 940

Query: 216  AIVFAVQKWEQYLISTHFIIRTDQKSLKWLLEQNVSTPFQQFWLSKLLGFDYEIQYNKGI 37
            A++FAV+KW  YL+ +HFII+TDQ+SLK+LLEQ ++TP QQ WL KLL FDYEIQY +G 
Sbjct: 941  AVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGK 1000

Query: 36   NNAAADALSRV 4
             N  ADALSRV
Sbjct: 1001 ENVVADALSRV 1011


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score =  178 bits (451), Expect = 5e-43
 Identities = 81/131 (61%), Positives = 109/131 (83%)
 Frame = -2

Query: 396  LVSAPVLALPDFSKKFIVETDASQGGIGAVLVQQGHPLAYISRALGPRWSNLSVYEKELL 217
            +++APVL LP+FSK+FI+ETDAS  GIG VL+Q+GHP+AYIS+AL  R+  LS YEKE+L
Sbjct: 799  MITAPVLXLPNFSKEFIIETDASGQGIGVVLMQEGHPIAYISKALSDRFQTLSTYEKEML 858

Query: 216  AIVFAVQKWEQYLISTHFIIRTDQKSLKWLLEQNVSTPFQQFWLSKLLGFDYEIQYNKGI 37
            AI+ A++KWE YL+  HF+I+TD +SLK+LLEQ V+TP QQ W++KL+ +DYEI+Y +G 
Sbjct: 859  AILMAIKKWESYLVDRHFVIKTDHQSLKYLLEQRVTTPTQQAWVAKLMQYDYEIRYKQGK 918

Query: 36   NNAAADALSRV 4
             N AADALSR+
Sbjct: 919  ENVAADALSRI 929


>emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
          Length = 1357

 Score =  176 bits (447), Expect = 1e-42
 Identities = 82/131 (62%), Positives = 110/131 (83%)
 Frame = -2

Query: 396  LVSAPVLALPDFSKKFIVETDASQGGIGAVLVQQGHPLAYISRALGPRWSNLSVYEKELL 217
            +++APVLALP+FSK+FI+ETDAS  GIGAVL+Q+GHP+AYIS+AL  R+  LS YEKE+L
Sbjct: 792  MITAPVLALPNFSKEFIIETDASGQGIGAVLMQEGHPIAYISKALSDRFQTLSTYEKEML 851

Query: 216  AIVFAVQKWEQYLISTHFIIRTDQKSLKWLLEQNVSTPFQQFWLSKLLGFDYEIQYNKGI 37
            AI+ A++KWE YL+  HF+I+TD +SLK+LLEQ V+TP QQ  ++KL+ +DYEI+Y +G 
Sbjct: 852  AILMAIKKWESYLVDRHFVIKTDHQSLKYLLEQRVTTPTQQALVAKLMQYDYEIRYKQGK 911

Query: 36   NNAAADALSRV 4
             N AADALSR+
Sbjct: 912  ENVAADALSRI 922


Top