BLASTX nr result
ID: Bupleurum21_contig00035220
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00035220
(606 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 291 8e-77
emb|CBI30711.3| unnamed protein product [Vitis vinifera] 291 8e-77
ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2... 291 8e-77
ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containi... 277 9e-73
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 277 1e-72
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 291 bits (744), Expect = 8e-77
Identities = 137/201 (68%), Positives = 158/201 (78%)
Frame = +1
Query: 4 EHYTCMVDLLSRAGKLGEAYRFIEDMPIKPDCFIWSALLRGCRIHHDVKLAEKVAEHVFE 183
EHY C+VDLL+RAG L +AY+FI+ MPI+PD IW ALL GCRI+HDVKLAEKVAEHVFE
Sbjct: 590 EHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE 649
Query: 184 LEPDNTGYYVLLANSYAEAERWEKVKSMRQKIVPRGLKKEQACSWIETKGKVHIFVAGNE 363
LEP+NTGYYVLLAN YAEAE+WE+VK +R++I RGL+K CSWIE KGKVHIFV G+
Sbjct: 650 LEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDS 709
Query: 364 AHPLANDIDXXXXXXXXXXXXXXHSPNMRYALINADEMRKEEARCGHSEKLAMAFGILGL 543
+HPLAN I+ H P MRYALI AD+ KE A CGHSEK+AMAFGIL L
Sbjct: 710 SHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSL 769
Query: 544 PPGKIIRVTKNIRVCSDCHEM 606
PPGK +RVTKN+RVC DCHEM
Sbjct: 770 PPGKTVRVTKNLRVCGDCHEM 790
>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 291 bits (744), Expect = 8e-77
Identities = 137/201 (68%), Positives = 158/201 (78%)
Frame = +1
Query: 4 EHYTCMVDLLSRAGKLGEAYRFIEDMPIKPDCFIWSALLRGCRIHHDVKLAEKVAEHVFE 183
EHY C+VDLL+RAG L +AY+FI+ MPI+PD IW ALL GCRI+HDVKLAEKVAEHVFE
Sbjct: 463 EHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE 522
Query: 184 LEPDNTGYYVLLANSYAEAERWEKVKSMRQKIVPRGLKKEQACSWIETKGKVHIFVAGNE 363
LEP+NTGYYVLLAN YAEAE+WE+VK +R++I RGL+K CSWIE KGKVHIFV G+
Sbjct: 523 LEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDS 582
Query: 364 AHPLANDIDXXXXXXXXXXXXXXHSPNMRYALINADEMRKEEARCGHSEKLAMAFGILGL 543
+HPLAN I+ H P MRYALI AD+ KE A CGHSEK+AMAFGIL L
Sbjct: 583 SHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSL 642
Query: 544 PPGKIIRVTKNIRVCSDCHEM 606
PPGK +RVTKN+RVC DCHEM
Sbjct: 643 PPGKTVRVTKNLRVCGDCHEM 663
>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
predicted protein [Populus trichocarpa]
Length = 571
Score = 291 bits (744), Expect = 8e-77
Identities = 137/202 (67%), Positives = 158/202 (78%)
Frame = +1
Query: 1 MEHYTCMVDLLSRAGKLGEAYRFIEDMPIKPDCFIWSALLRGCRIHHDVKLAEKVAEHVF 180
+EHY C+VDLL+R+GKL AY+FI+ MPI+PD IW ALL GCRIHHDVKLAEKVAEHVF
Sbjct: 336 LEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVF 395
Query: 181 ELEPDNTGYYVLLANSYAEAERWEKVKSMRQKIVPRGLKKEQACSWIETKGKVHIFVAGN 360
ELEP+NTGYYVLLAN+YAEAE+WE+VK +RQKI RGLKK CSWIE K KVHIF+AGN
Sbjct: 396 ELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGN 455
Query: 361 EAHPLANDIDXXXXXXXXXXXXXXHSPNMRYALINADEMRKEEARCGHSEKLAMAFGILG 540
+HP A I+ + P RYALINAD ++KE A CGHSEKLAMAFGIL
Sbjct: 456 SSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILN 515
Query: 541 LPPGKIIRVTKNIRVCSDCHEM 606
LPP + IRV+KN+RVC DCHEM
Sbjct: 516 LPPARTIRVSKNLRVCGDCHEM 537
>ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 277 bits (709), Expect = 9e-73
Identities = 134/202 (66%), Positives = 149/202 (73%)
Frame = +1
Query: 1 MEHYTCMVDLLSRAGKLGEAYRFIEDMPIKPDCFIWSALLRGCRIHHDVKLAEKVAEHVF 180
+EHY CMVDLL+R G L +AY IE MPIKPD IW ALL GCRIHHDV+LAEKVAEHVF
Sbjct: 992 LEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVF 1051
Query: 181 ELEPDNTGYYVLLANSYAEAERWEKVKSMRQKIVPRGLKKEQACSWIETKGKVHIFVAGN 360
ELEPDN GYYVLLAN YAEAE+WE+VK +R++I RGLKK CSWIE +GK FV+ +
Sbjct: 1052 ELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSAD 1111
Query: 361 EAHPLANDIDXXXXXXXXXXXXXXHSPNMRYALINADEMRKEEARCGHSEKLAMAFGILG 540
AHP A I HSP MRYALINA +M KE A CGHSEKLAMAFGIL
Sbjct: 1112 TAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILN 1171
Query: 541 LPPGKIIRVTKNIRVCSDCHEM 606
LP G+ IRV KN+RVC DCHEM
Sbjct: 1172 LPSGRTIRVAKNLRVCDDCHEM 1193
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 277 bits (708), Expect = 1e-72
Identities = 133/202 (65%), Positives = 155/202 (76%)
Frame = +1
Query: 1 MEHYTCMVDLLSRAGKLGEAYRFIEDMPIKPDCFIWSALLRGCRIHHDVKLAEKVAEHVF 180
+EHY CMVDLL+R G L +A++FI+ MPIKPD IW ALL GCRIHHDVKLAEKVAE +F
Sbjct: 691 LEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIF 750
Query: 181 ELEPDNTGYYVLLANSYAEAERWEKVKSMRQKIVPRGLKKEQACSWIETKGKVHIFVAGN 360
ELEP+NTGYYVLLAN YAEAE+WE+V+ +R+KI RGLKK CSWIE KGK++IFVAG+
Sbjct: 751 ELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGD 810
Query: 361 EAHPLANDIDXXXXXXXXXXXXXXHSPNMRYALINADEMRKEEARCGHSEKLAMAFGILG 540
+ P A I+ +SP YAL+NADE KE A CGHSEKLAMAFG+L
Sbjct: 811 CSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLN 870
Query: 541 LPPGKIIRVTKNIRVCSDCHEM 606
LPPGK IRVTKN+RVC DCHEM
Sbjct: 871 LPPGKTIRVTKNLRVCGDCHEM 892