BLASTX nr result

ID: Bupleurum21_contig00035218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035218
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532371.1| conserved hypothetical protein [Ricinus comm...    69   3e-10
ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplasti...    64   2e-08
ref|XP_003580028.1| PREDICTED: CDT1-like protein a, chloroplasti...    59   3e-07
gb|AFW85860.1| hypothetical protein ZEAMMB73_066419 [Zea mays]         59   4e-07
ref|XP_002437834.1| hypothetical protein SORBIDRAFT_10g003390 [S...    59   4e-07

>ref|XP_002532371.1| conserved hypothetical protein [Ricinus communis]
           gi|223527927|gb|EEF30014.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 578

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
 Frame = -1

Query: 286 AHPEGDEVPEATLPEPFNKSKQGLVDMDTIHASNFSVTNDKS---VLSGQQPVPASHLSQ 116
           AHPEGDE+P+  LPEPFN+SK  L    T  +++ S+    +   +   Q PV ASH S+
Sbjct: 226 AHPEGDEIPKELLPEPFNRSKLDLSSGTTKPSTSLSIIETPAGTQMAKSQLPVAASHFSK 285

Query: 115 SFRRGFSKRASSSEVVSTNLVQPVAVCQTTVLPISTP 5
           SF R FS++ +++EV  T    P    Q +V  +  P
Sbjct: 286 SFTRRFSQKLTNTEVEITCQGYPTVCSQQSVFSVPEP 322


>ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Vitis vinifera]
          Length = 646

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = -1

Query: 286 AHPEGDEVPEATLPEPFNKSKQGL-VDMDTIHASNFSVTNDKSVLSGQQPVPASHLSQSF 110
           AHPEGDE+PE TLPEPF++SKQ L  +M     S+        VL  Q    ASHLS+ F
Sbjct: 290 AHPEGDEIPEETLPEPFSQSKQDLHSNMIKDSYSSLPAETSCDVLMEQPQAVASHLSRCF 349

Query: 109 RRGFSKRASSSEVVSTNLVQPVAVCQTTVLPISTP 5
           +R FS++  S E  ++N        Q + LP+  P
Sbjct: 350 QRRFSQKI-SGEAENSNKKPANFSLQLSDLPVQDP 383


>ref|XP_003580028.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Brachypodium
           distachyon]
          Length = 576

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
 Frame = -1

Query: 286 AHPEGDEVPEATLPEPFNKSKQGLVDMDTIHASNFSVTNDKSVLSGQQPVPASHLSQSFR 107
           +HPEGD++PE  LP PF ++K  +           +       L+ QQPV  SH+S SF+
Sbjct: 247 SHPEGDDIPEHELPHPFTRTKSSVAQFSP-RVPQVAPAVPSPCLAEQQPVMMSHMSHSFK 305

Query: 106 RGFSKRASSSEVVSTNLVQPVAVCQ--TTVLPIS 11
           R FS+R+S+    ++    PVA  +  TT  P+S
Sbjct: 306 RRFSQRSSTCPATASG-TSPVAKVEPTTTQSPLS 338


>gb|AFW85860.1| hypothetical protein ZEAMMB73_066419 [Zea mays]
          Length = 573

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = -1

Query: 283 HPEGDEVPEATLPEPFNKSKQGLVDMDTIHASNFSVTNDKSVLSGQQPVPA--SHLSQSF 110
           HPEGD++PE  LP PFN+++  L   +   A   S     S ++GQQ   A  SH+SQSF
Sbjct: 241 HPEGDDIPEHELPHPFNRARSSLPQDEQRTAPESSSPLKPSDVNGQQQTAAVMSHMSQSF 300

Query: 109 RRGFSKRASSSEVVSTNLVQPVAVCQTTVLPIS 11
           +R FS+R+      ++     V    T   P+S
Sbjct: 301 KRRFSQRSPIGSATASAPSPLVKAASTAPSPLS 333


>ref|XP_002437834.1| hypothetical protein SORBIDRAFT_10g003390 [Sorghum bicolor]
           gi|241916057|gb|EER89201.1| hypothetical protein
           SORBIDRAFT_10g003390 [Sorghum bicolor]
          Length = 575

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/91 (35%), Positives = 47/91 (51%)
 Frame = -1

Query: 283 HPEGDEVPEATLPEPFNKSKQGLVDMDTIHASNFSVTNDKSVLSGQQPVPASHLSQSFRR 104
           HPEGD++PE  LP PFN++   +   +       S     S ++GQQ    SH+SQSF+R
Sbjct: 247 HPEGDDIPEHELPHPFNRTGSSMTQDEQRTVPQSSSPVKPSDVTGQQTAVMSHMSQSFKR 306

Query: 103 GFSKRASSSEVVSTNLVQPVAVCQTTVLPIS 11
            FS+R+  S   ++       V  T   P+S
Sbjct: 307 RFSQRSPISSTTASAPSPLGKVASTVPSPLS 337


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