BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035203
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15206.3| unnamed protein product [Vitis vinifera]              285   5e-75
emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]   285   5e-75
ref|XP_002514737.1| pentatricopeptide repeat-containing protein,...   280   3e-73
ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|2...   256   3e-66
ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containi...   256   4e-66

>emb|CBI15206.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  285 bits (730), Expect = 5e-75
 Identities = 136/244 (55%), Positives = 170/244 (69%)
 Frame = +1

Query: 1   LWNTMIRGFVRTMQVQNIFGYFKKMQENGEKADNFTFSFLLKVCGQLGSVLLGKQIHCSC 180
           LWNTMIRG  RT Q +  F ++K+MQ  GE  DNFT+SFL+KVCGQLGS LLGKQIHC+ 
Sbjct: 18  LWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHCNV 77

Query: 181 VKHGFEDHVFVRNTLIHMYGMLGNVDNAHYLFEGMPKRNLVTWNVIIDCHVSCGNYKEAV 360
           +KHG E+HVFVRNTL+HMYGM  +++ A +LFE MPK  LV WN IIDC+V CG YKEA+
Sbjct: 78  LKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAI 137

Query: 361 ELFVRMMRCGVNPDGTTXXXXXXXXXXXGNLELGRWIRRLVDDTGMGSDVKVSNSLIDMY 540
           ELF RM++ G+ PD  T           G L++GR +   +D TG+G+ V VSNSLIDMY
Sbjct: 138 ELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMY 197

Query: 541 AKCGQVDEARKVFSMMSKRSLVTWNTMILGLATHGHXXXXXXXXXXXXXXXXXXPNDITF 720
           AKCG V+ A ++F+ M  R++V+WNTMILGLA HGH                  PN++TF
Sbjct: 198 AKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTF 257

Query: 721 LGVL 732
           LGVL
Sbjct: 258 LGVL 261



 Score =  100 bits (248), Expect = 4e-19
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 4/219 (1%)
 Frame = +1

Query: 4   WNTMIRGFVRTMQVQNIFGYFKKMQENGEKADNFTFSFLLKVCGQLGSVLLGKQIHCSCV 183
           WNT+I   V   + +     F +M ++G K D+ TF   L  C  LG + +G+++H SC+
Sbjct: 120 WNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVH-SCI 178

Query: 184 KH-GFEDHVFVRNTLIHMYGMLGNVDNAHYLFEGMPKRNLVTWNVIIDCHVSCGNYKEAV 360
            H G  + V V N+LI MY   G V+ A+ +F  M  RN+V+WN +I      G+  EA+
Sbjct: 179 DHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEAL 238

Query: 361 ELFVRMMRCGV-NPDGTTXXXXXXXXXXXGNLELGR-WIRRLVDDTGMGSDVKVSNSLID 534
           ELF +M+   +  P+  T           G +E GR +   +  D  +   +K   S++D
Sbjct: 239 ELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVD 298

Query: 535 MYAKCGQVDEA-RKVFSMMSKRSLVTWNTMILGLATHGH 648
           +  + G V+EA R + SM  + + + W T++     HG+
Sbjct: 299 ILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGN 337


>emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
          Length = 516

 Score =  285 bits (730), Expect = 5e-75
 Identities = 136/244 (55%), Positives = 170/244 (69%)
 Frame = +1

Query: 1   LWNTMIRGFVRTMQVQNIFGYFKKMQENGEKADNFTFSFLLKVCGQLGSVLLGKQIHCSC 180
           LWNTMIRG  RT Q +  F ++K+MQ  GE  DNFT+SFL+KVCGQLGS LLGKQIHC+ 
Sbjct: 118 LWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHCNV 177

Query: 181 VKHGFEDHVFVRNTLIHMYGMLGNVDNAHYLFEGMPKRNLVTWNVIIDCHVSCGNYKEAV 360
           +KHG E+HVFVRNTL+HMYGM  +++ A +LFE MPK  LV WN IIDC+V CG YKEA+
Sbjct: 178 LKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAI 237

Query: 361 ELFVRMMRCGVNPDGTTXXXXXXXXXXXGNLELGRWIRRLVDDTGMGSDVKVSNSLIDMY 540
           ELF RM++ G+ PD  T           G L++GR +   +D TG+G+ V VSNSLIDMY
Sbjct: 238 ELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMY 297

Query: 541 AKCGQVDEARKVFSMMSKRSLVTWNTMILGLATHGHXXXXXXXXXXXXXXXXXXPNDITF 720
           AKCG V+ A ++F+ M  R++V+WNTMILGLA HGH                  PN++TF
Sbjct: 298 AKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTF 357

Query: 721 LGVL 732
           LGVL
Sbjct: 358 LGVL 361



 Score =  100 bits (248), Expect = 4e-19
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 4/219 (1%)
 Frame = +1

Query: 4   WNTMIRGFVRTMQVQNIFGYFKKMQENGEKADNFTFSFLLKVCGQLGSVLLGKQIHCSCV 183
           WNT+I   V   + +     F +M ++G K D+ TF   L  C  LG + +G+++H SC+
Sbjct: 220 WNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVH-SCI 278

Query: 184 KH-GFEDHVFVRNTLIHMYGMLGNVDNAHYLFEGMPKRNLVTWNVIIDCHVSCGNYKEAV 360
            H G  + V V N+LI MY   G V+ A+ +F  M  RN+V+WN +I      G+  EA+
Sbjct: 279 DHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEAL 338

Query: 361 ELFVRMMRCGV-NPDGTTXXXXXXXXXXXGNLELGR-WIRRLVDDTGMGSDVKVSNSLID 534
           ELF +M+   +  P+  T           G +E GR +   +  D  +   +K   S++D
Sbjct: 339 ELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVD 398

Query: 535 MYAKCGQVDEA-RKVFSMMSKRSLVTWNTMILGLATHGH 648
           +  + G V+EA R + SM  + + + W T++     HG+
Sbjct: 399 ILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGN 437


>ref|XP_002514737.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546341|gb|EEF47843.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 374

 Score =  280 bits (715), Expect = 3e-73
 Identities = 130/244 (53%), Positives = 170/244 (69%)
 Frame = +1

Query: 1   LWNTMIRGFVRTMQVQNIFGYFKKMQENGEKADNFTFSFLLKVCGQLGSVLLGKQIHCSC 180
           LWNTMIRGF ++ + Q  F Y+K+MQE G  ADNFTFSFL+KVCGQLGSVLLGKQ+HCS 
Sbjct: 99  LWNTMIRGFGKSNEPQRAFEYYKRMQEEGLMADNFTFSFLIKVCGQLGSVLLGKQMHCSV 158

Query: 181 VKHGFEDHVFVRNTLIHMYGMLGNVDNAHYLFEGMPKRNLVTWNVIIDCHVSCGNYKEAV 360
           +K+GFE HVFVRNTLIHMYG+  + + +  LFE +P   LV WN +I C+V CG +KEA+
Sbjct: 159 LKYGFESHVFVRNTLIHMYGIFKDFEISRQLFEEIPSPELVAWNTVIGCYVDCGRFKEAL 218

Query: 361 ELFVRMMRCGVNPDGTTXXXXXXXXXXXGNLELGRWIRRLVDDTGMGSDVKVSNSLIDMY 540
           ++F RM++  + PD  T           G L++GRWI   + +TG+G  V+++NS+IDMY
Sbjct: 219 DMFSRMLKLHIEPDEATLVVILAACSALGELDIGRWIHSCISNTGLGRFVEINNSIIDMY 278

Query: 541 AKCGQVDEARKVFSMMSKRSLVTWNTMILGLATHGHXXXXXXXXXXXXXXXXXXPNDITF 720
           AKCG ++EA + F+ MS+R+ VTWNTMILGLATHGH                  P+ +TF
Sbjct: 279 AKCGALEEAYEAFNKMSQRNTVTWNTMILGLATHGHTNEALVLFSKMLEQKLMEPDSVTF 338

Query: 721 LGVL 732
           LGVL
Sbjct: 339 LGVL 342



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 43/155 (27%), Positives = 64/155 (41%)
 Frame = +1

Query: 160 KQIHCSCVKHGFEDHVFVRNTLIHMYGMLGNVDNAHYLFEGMPKRNLVTWNVIIDCHVSC 339
           KQIH   V+ GFE ++FV                   +FE +   +   WN +I      
Sbjct: 69  KQIHACIVQSGFEQNLFV------------------IVFENIECPDEFLWNTMIRGFGKS 110

Query: 340 GNYKEAVELFVRMMRCGVNPDGTTXXXXXXXXXXXGNLELGRWIRRLVDDTGMGSDVKVS 519
              + A E + RM   G+  D  T           G++ LG+ +   V   G  S V V 
Sbjct: 111 NEPQRAFEYYKRMQEEGLMADNFTFSFLIKVCGQLGSVLLGKQMHCSVLKYGFESHVFVR 170

Query: 520 NSLIDMYAKCGQVDEARKVFSMMSKRSLVTWNTMI 624
           N+LI MY      + +R++F  +    LV WNT+I
Sbjct: 171 NTLIHMYGIFKDFEISRQLFEEIPSPELVAWNTVI 205


>ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|222868524|gb|EEF05655.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  256 bits (655), Expect = 3e-66
 Identities = 121/244 (49%), Positives = 162/244 (66%)
 Frame = +1

Query: 1   LWNTMIRGFVRTMQVQNIFGYFKKMQENGEKADNFTFSFLLKVCGQLGSVLLGKQIHCSC 180
           ++NTMIRGF +    +  F Y+K+MQE G  +D+FTFSFLLKVCGQLG VLLG+ +HCS 
Sbjct: 55  IFNTMIRGFGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCST 114

Query: 181 VKHGFEDHVFVRNTLIHMYGMLGNVDNAHYLFEGMPKRNLVTWNVIIDCHVSCGNYKEAV 360
           +K G   HVFVRNTL+HMYG   +++ +  LFE +P   LV WN+IIDCHVSCG + EA+
Sbjct: 115 LKRGLNSHVFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEAL 174

Query: 361 ELFVRMMRCGVNPDGTTXXXXXXXXXXXGNLELGRWIRRLVDDTGMGSDVKVSNSLIDMY 540
           E+F RM++ G+ PD  T           G L+ GRW+   + + G G   +V+NSL+DMY
Sbjct: 175 EMFSRMLKFGIEPDEATFVVILSACSALGALDFGRWVHSCISNIGHGCITEVNNSLLDMY 234

Query: 541 AKCGQVDEARKVFSMMSKRSLVTWNTMILGLATHGHXXXXXXXXXXXXXXXXXXPNDITF 720
           AKCG + EA ++F+ M+K++ VTWNTMILGLA+HG+                  P+DITF
Sbjct: 235 AKCGALQEAFEIFNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITF 294

Query: 721 LGVL 732
           L VL
Sbjct: 295 LVVL 298



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
 Frame = +1

Query: 160 KQIHCSCVKHGFEDHVFVRNTLIHMYGML--GNVDNAHYLFEGMPKRNLVTWNVIIDCHV 333
           KQIH   ++ GFE + FV   +I        G+++ A  +FE +   +   +N +I    
Sbjct: 5   KQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMIRGFG 64

Query: 334 SCGNYKEAVELFVRMMRCGVNPDGTTXXXXXXXXXXXGNLELGRWIRRLVDDTGMGSDVK 513
              + ++A + + RM   G+  D  T           G + LGR +       G+ S V 
Sbjct: 65  KANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGLNSHVF 124

Query: 514 VSNSLIDMYAKCGQVDEARKVFSMMSKRSLVTWNTMI 624
           V N+L+ MY     ++ +R++F  +    LV WN +I
Sbjct: 125 VRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIII 161


>ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
           gi|449477575|ref|XP_004155061.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
          Length = 506

 Score =  256 bits (653), Expect = 4e-66
 Identities = 124/244 (50%), Positives = 163/244 (66%)
 Frame = +1

Query: 1   LWNTMIRGFVRTMQVQNIFGYFKKMQENGEKADNFTFSFLLKVCGQLGSVLLGKQIHCSC 180
           LWNTMIRGF R  ++   F ++K+M E G  ADNFTFSFLLK+ GQLGS++LGKQ+H + 
Sbjct: 122 LWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNI 181

Query: 181 VKHGFEDHVFVRNTLIHMYGMLGNVDNAHYLFEGMPKRNLVTWNVIIDCHVSCGNYKEAV 360
           +K G + HV+VRNTLIHMYG L +V+ A  LF+ +PK +LV WN +IDCHVSCG Y EA+
Sbjct: 182 LKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEAL 241

Query: 361 ELFVRMMRCGVNPDGTTXXXXXXXXXXXGNLELGRWIRRLVDDTGMGSDVKVSNSLIDMY 540
           +LFV+M++ GV PD  T           G L+ GRW+   V+    G  + V NSLIDMY
Sbjct: 242 DLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDMY 301

Query: 541 AKCGQVDEARKVFSMMSKRSLVTWNTMILGLATHGHXXXXXXXXXXXXXXXXXXPNDITF 720
           AKCG V+ AR++F+ +S +++VTWNTMI+GLATHG                   P+ +TF
Sbjct: 302 AKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTF 361

Query: 721 LGVL 732
           L VL
Sbjct: 362 LAVL 365



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
 Frame = +1

Query: 58  GYFKKMQENGEKADNFTFSFLLKVCGQLGSVLLGKQIHCSCVKHGFEDHVFVRNTLIHMY 237
           GYF K Q+         F FL K C  L  +    Q+H S ++ GF+ ++FV   LI   
Sbjct: 50  GYFAKEQK---------FMFLFKQCSTLKDL---NQLHASIIRLGFDQNLFVIGKLIDFC 97

Query: 238 GML--GNVDNAHYLFEGMPKRNLVTWNVIIDCHVSCGNYKEAVELFVRMMRCGVNPDGTT 411
            +   G+++ A  +F+ +   +   WN +I           A E + RM+  G+  D  T
Sbjct: 98  AVSDHGDMNYAVVVFDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFT 157

Query: 412 XXXXXXXXXXXGNLELGRWIRRLVDDTGMGSDVKVSNSLIDMYAKCGQVDEARKVFSMMS 591
                      G++ LG+ +   +   G+ S V V N+LI MY +   V+ AR +F  + 
Sbjct: 158 FSFLLKMTGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELP 217

Query: 592 KRSLVTWNTMI 624
           K  LV WN +I
Sbjct: 218 KTDLVAWNAVI 228