BLASTX nr result

ID: Bupleurum21_contig00035200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035200
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]          77   2e-12
emb|CBI32369.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis v...    76   3e-12
emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]    75   4e-12
ref|XP_002306769.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11

>gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]
          Length = 701

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 53/135 (39%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
 Frame = +3

Query: 6   TGLKRPHA-PLKALPLEDALSEQDIYYSQTLTTILESNHRYFXXXXXXXXXXXXXXXGQS 182
           +GL++P   P    P  D LS++D +YSQT++TIL+  H+                  QS
Sbjct: 368 SGLQQPPPQPPTGPPPLDELSQEDTHYSQTVSTILQ--HQPNRWSESSSSGCIAPYSSQS 425

Query: 183 AFTVCTPATKSKSHHRKSNRTSQFLLKYMIFNVPSLHTK-----SDNRDIADSTSQLTKS 347
           AF   T       H      TSQ+LLKY++F+VP LHTK     S      DS  +  K 
Sbjct: 426 AFAKWTTRCDHHHHPMAVEGTSQWLLKYILFSVPFLHTKYRDENSPKSRDGDSAGRFRKG 485

Query: 348 NSQEELSANHVLAER 392
             Q+ELSANHVLAER
Sbjct: 486 TPQDELSANHVLAER 500


>emb|CBI32369.3| unnamed protein product [Vitis vinifera]
          Length = 620

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 52/133 (39%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
 Frame = +3

Query: 9   GLKRPHAPLKALPLEDALSEQDIYYSQTLTTILESNHRYFXXXXXXXXXXXXXXXGQSAF 188
           G   P  P    P  D LS +D +YSQT++TIL+  H+                  QSAF
Sbjct: 289 GSSPPPQPPTGPPPLDELSHEDTHYSQTVSTILQ--HQPNRWSESSSSGCIAPYSSQSAF 346

Query: 189 TVCTPATKSKSHHRKSNRTSQFLLKYMIFNVPSLHTK-----SDNRDIADSTSQLTKSNS 353
              T       H      TSQ+LLKY++F+VP LHTK     S      DS  +  K   
Sbjct: 347 AKWTTRCDHHHHPMAVEGTSQWLLKYILFSVPFLHTKYRDENSPKSRDGDSAGRFRKGTP 406

Query: 354 QEELSANHVLAER 392
           Q+ELSANHVLAER
Sbjct: 407 QDELSANHVLAER 419


>ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera]
          Length = 696

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
 Frame = +3

Query: 6   TGLKRPHA-PLKALPLEDALSEQDIYYSQTLTTILESNHRYFXXXXXXXXXXXXXXXGQS 182
           +GL++P   P    P  D LS +D +YSQT++TIL+  H+                  QS
Sbjct: 363 SGLQQPPPQPPTGPPPLDELSHEDTHYSQTVSTILQ--HQPNRWSESSSSGCIAPYSSQS 420

Query: 183 AFTVCTPATKSKSHHRKSNRTSQFLLKYMIFNVPSLHTK-----SDNRDIADSTSQLTKS 347
           AF   T       H      TSQ+LLKY++F+VP LHTK     S      DS  +  K 
Sbjct: 421 AFAKWTTRCDHHHHPMAVEGTSQWLLKYILFSVPFLHTKYRDENSPKSRDGDSAGRFRKG 480

Query: 348 NSQEELSANHVLAER 392
             Q+ELSANHVLAER
Sbjct: 481 TPQDELSANHVLAER 495


>emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]
          Length = 668

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
 Frame = +3

Query: 6   TGLKRPHA-PLKALPLEDALSEQDIYYSQTLTTILESNHRYFXXXXXXXXXXXXXXXGQS 182
           +GL++P   P    P  D LS +D +YSQT++TIL+  H+                  QS
Sbjct: 335 SGLQQPPPQPPTGPPPLDELSXEDTHYSQTVSTILQ--HQPNRWSESSSSGCIAPYSSQS 392

Query: 183 AFTVCTPATKSKSHHRKSNRTSQFLLKYMIFNVPSLHTK-----SDNRDIADSTSQLTKS 347
           AF   T       H      TSQ+LLKY++F+VP LHTK     S      DS  +  K 
Sbjct: 393 AFAKWTTRCDHHHHPMAVEGTSQWLLKYILFSVPFLHTKYRDENSPKSRDGDSAGRFRKG 452

Query: 348 NSQEELSANHVLAER 392
             Q+ELSANHVLAER
Sbjct: 453 TPQDELSANHVLAER 467


>ref|XP_002306769.1| predicted protein [Populus trichocarpa] gi|222856218|gb|EEE93765.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
 Frame = +3

Query: 45  PLEDALSEQDIYYSQTLTTILESNHRYFXXXXXXXXXXXXXXXGQSAFTVCTPATKSKSH 224
           PLED L+++D +YSQT++TIL+S   +                 QSAF+  T  +     
Sbjct: 260 PLED-LAQEDTHYSQTISTILQSQPGWLAAEPSSIAYEARYH--QSAFSRWTNRS-DHLF 315

Query: 225 HRKSNRTSQFLLKYMIFNVPSLHTKS--DN----RDIADSTSQLTKSNSQEELSANHVLA 386
           H     TSQ+LLKY++F+VP LH+KS  DN    RD  ++ S+  K   Q+ELSANHVLA
Sbjct: 316 HVSVETTSQWLLKYILFSVPHLHSKSREDNSPKSRD-GEAASRFRKGTPQDELSANHVLA 374

Query: 387 ER 392
           ER
Sbjct: 375 ER 376


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