BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035198
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
emb|CBI30210.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containi...   151   5e-35
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35

>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/130 (62%), Positives = 101/130 (77%)
 Frame = +3

Query: 3   GTINSVVALFDSMPLKDVITWTEVMRAYMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLC 182
           G+I  VVALF+ M ++DVITWTE++ AYM  GL D A+E+F++MP +NS+SYNA+LSG C
Sbjct: 321 GSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFC 380

Query: 183 QNGRGSMALNLFSTMVKEGMELTDFTLTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYR 362
           QNG GS AL  F  MV+EG+ELTDFTLT V+NACGLL E   S+ I GF++K GFGSN  
Sbjct: 381 QNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNAC 440

Query: 363 IESALFDMFT 392
           IE+AL DM T
Sbjct: 441 IEAALLDMCT 450



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/114 (27%), Positives = 61/114 (53%)
 Frame = +3

Query: 48  KDVITWTEVMRAYMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLCQNGRGSMALNLFSTM 227
           +D+     ++ AY+ +G+V  A ++F  +   N VSY A++SG  ++ R   A+ +F  M
Sbjct: 103 EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 162

Query: 228 VKEGMELTDFTLTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYRIESALFDMF 389
              G+EL +F+  +++  C  L +      +   VIK+GF +   + +AL  ++
Sbjct: 163 RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLY 216


>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/130 (62%), Positives = 101/130 (77%)
 Frame = +3

Query: 3   GTINSVVALFDSMPLKDVITWTEVMRAYMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLC 182
           G+I  VVALF+ M ++DVITWTE++ AYM  GL D A+E+F++MP +NS+SYNA+LSG C
Sbjct: 339 GSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFC 398

Query: 183 QNGRGSMALNLFSTMVKEGMELTDFTLTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYR 362
           QNG GS AL  F  MV+EG+ELTDFTLT V+NACGLL E   S+ I GF++K GFGSN  
Sbjct: 399 QNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNAC 458

Query: 363 IESALFDMFT 392
           IE+AL DM T
Sbjct: 459 IEAALLDMCT 468



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/114 (27%), Positives = 61/114 (53%)
 Frame = +3

Query: 48  KDVITWTEVMRAYMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLCQNGRGSMALNLFSTM 227
           +D+     ++ AY+ +G+V  A ++F  +   N VSY A++SG  ++ R   A+ +F  M
Sbjct: 121 EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 180

Query: 228 VKEGMELTDFTLTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYRIESALFDMF 389
              G+EL +F+  +++  C  L +      +   VIK+GF +   + +AL  ++
Sbjct: 181 RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLY 234


>ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|222868119|gb|EEF05250.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  166 bits (420), Expect = 2e-39
 Identities = 82/128 (64%), Positives = 100/128 (78%)
 Frame = +3

Query: 3   GTINSVVALFDSMPLKDVITWTEVMRAYMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLC 182
           G++N V ALF+ MP++D+ITWTE++ AYM  GLVD AV++FN+MP+KNSVSYNALL+G C
Sbjct: 354 GSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFC 413

Query: 183 QNGRGSMALNLFSTMVKEGMELTDFTLTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYR 362
           +N  G  ALNLF  MV+EG ELTDFTLT VINACGLL +   S  I GF+IK GF SN  
Sbjct: 414 KNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNAC 473

Query: 363 IESALFDM 386
           IE+AL DM
Sbjct: 474 IEAALIDM 481



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
 Frame = +3

Query: 84  YMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLCQNGRGSMALNLFSTM-VKEGMELTDFT 260
           Y   G +D A+ +F+ MP+++  S+N ++S L +      AL LF  +   +G +   FT
Sbjct: 248 YGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFT 307

Query: 261 LTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYRIESALFDMFT 392
           L++++ AC   + +     I  + I++G  +N  + +A+   +T
Sbjct: 308 LSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYT 351



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/106 (29%), Positives = 56/106 (52%)
 Frame = +3

Query: 72  VMRAYMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLCQNGRGSMALNLFSTMVKEGMELT 251
           V+ AY+ +GLV +A E+F  M   + VSY+AL+S   +  R + A+ LF  M   G+E  
Sbjct: 143 VIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPN 202

Query: 252 DFTLTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYRIESALFDMF 389
           +++  +++ AC    E      +    IK+G+     + +AL  ++
Sbjct: 203 EYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLY 248


>ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/130 (53%), Positives = 100/130 (76%)
 Frame = +3

Query: 3   GTINSVVALFDSMPLKDVITWTEVMRAYMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLC 182
           G ++ V  LF+ M ++DVITWTE++ AYM  GLV+ A+++F+ MP+KNSVSYN +L+G C
Sbjct: 313 GNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFC 372

Query: 183 QNGRGSMALNLFSTMVKEGMELTDFTLTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYR 362
           +N +G  A+ LF  MV+EG+ELTDF+LTSV++ACGLL +   S+ + GF +K GFGSN  
Sbjct: 373 RNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGY 432

Query: 363 IESALFDMFT 392
           +E+AL DM+T
Sbjct: 433 VEAALLDMYT 442


>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/130 (55%), Positives = 99/130 (76%)
 Frame = +3

Query: 3   GTINSVVALFDSMPLKDVITWTEVMRAYMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLC 182
           G+ N V  LF++MP++DVITWT ++ +YM  G++D AVE+FN+MPK+N +SYNA+L+GL 
Sbjct: 347 GSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLS 406

Query: 183 QNGRGSMALNLFSTMVKEGMELTDFTLTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYR 362
           +N  GS AL LF  M++EG+E++D TLTS+I ACGLL     S+ IQGFV+K G  SN  
Sbjct: 407 RNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSC 466

Query: 363 IESALFDMFT 392
           IE+AL DM+T
Sbjct: 467 IETALVDMYT 476



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/114 (28%), Positives = 62/114 (54%)
 Frame = +3

Query: 48  KDVITWTEVMRAYMAVGLVDEAVEIFNRMPKKNSVSYNALLSGLCQNGRGSMALNLFSTM 227
           +D+     ++ AY+ +GLV +A ++F+ +   N VSY AL+SG  ++     A+ LF  M
Sbjct: 128 EDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAM 187

Query: 228 VKEGMELTDFTLTSVINACGLLNEKWTSEMIQGFVIKVGFGSNYRIESALFDMF 389
           +  G+E  ++T  +++ AC    +      + G V+K+G  S   I +AL  ++
Sbjct: 188 LDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLY 241