BLASTX nr result

ID: Bupleurum21_contig00035197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035197
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270380.2| PREDICTED: uncharacterized protein At1g28695...   198   3e-49
emb|CBI26472.3| unnamed protein product [Vitis vinifera]              198   3e-49
ref|XP_002511046.1| pentatricopeptide repeat-containing protein,...   191   5e-47
ref|XP_002339511.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
ref|XP_003520411.1| PREDICTED: uncharacterized protein At1g28695...   191   7e-47

>ref|XP_002270380.2| PREDICTED: uncharacterized protein At1g28695 [Vitis vinifera]
          Length = 341

 Score =  198 bits (504), Expect = 3e-49
 Identities = 94/146 (64%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
 Frame = -3

Query: 439 PFPHLMLNHSIDFQISTDKFF-NQWSQDRLINTGFYMINSNNKTIALFESWYAQKDNSKG 263
           PFP L LN S+D QISTD F  ++WS+   INTGFYMI SNNKTI LF  WYAQ++NS G
Sbjct: 187 PFPRLTLNQSVDLQISTDDFNGDEWSESNHINTGFYMIKSNNKTIQLFGMWYAQRNNSNG 246

Query: 262 LKEQDVLLNLLRQGAFQKLNITTRFLDTLYFSGFCQDSRDVRVVSTVHANCCRSISAKVA 83
           LKEQDVL  + + G F+ L +  RFLD+LYFSGFC++S+D +VV+TVHA CCRSI AKVA
Sbjct: 247 LKEQDVLDGMQKDGVFRDLGVKARFLDSLYFSGFCKESKDFKVVTTVHATCCRSIHAKVA 306

Query: 82  DLMTVIHDWKRFLSLSANETSTFQWS 5
           DL  V+HDW RF +   NETSTFQWS
Sbjct: 307 DLTVVLHDWLRFKNSPTNETSTFQWS 332


>emb|CBI26472.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  198 bits (504), Expect = 3e-49
 Identities = 94/146 (64%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
 Frame = -3

Query: 439 PFPHLMLNHSIDFQISTDKFF-NQWSQDRLINTGFYMINSNNKTIALFESWYAQKDNSKG 263
           PFP L LN S+D QISTD F  ++WS+   INTGFYMI SNNKTI LF  WYAQ++NS G
Sbjct: 118 PFPRLTLNQSVDLQISTDDFNGDEWSESNHINTGFYMIKSNNKTIQLFGMWYAQRNNSNG 177

Query: 262 LKEQDVLLNLLRQGAFQKLNITTRFLDTLYFSGFCQDSRDVRVVSTVHANCCRSISAKVA 83
           LKEQDVL  + + G F+ L +  RFLD+LYFSGFC++S+D +VV+TVHA CCRSI AKVA
Sbjct: 178 LKEQDVLDGMQKDGVFRDLGVKARFLDSLYFSGFCKESKDFKVVTTVHATCCRSIHAKVA 237

Query: 82  DLMTVIHDWKRFLSLSANETSTFQWS 5
           DL  V+HDW RF +   NETSTFQWS
Sbjct: 238 DLTVVLHDWLRFKNSPTNETSTFQWS 263


>ref|XP_002511046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550161|gb|EEF51648.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 360

 Score =  191 bits (485), Expect = 5e-47
 Identities = 94/142 (66%), Positives = 113/142 (79%), Gaps = 2/142 (1%)
 Frame = -3

Query: 439 PFPHLMLNHSIDFQISTDKFF-NQWSQDRLINTGFYMINSNNKTIALFESWYAQKDNSKG 263
           PFP L+L+ S+DFQISTDKF  ++WS+   INTGFYMI SNNKTI LF+SWYA+KD S G
Sbjct: 204 PFPKLVLDGSVDFQISTDKFNRDEWSEANPINTGFYMIRSNNKTIELFDSWYARKDRSVG 263

Query: 262 LKEQDVLLNLLRQGAFQKLNITTRFLDTLYFSGFCQDSRDVRVVSTVHANCCRSISAKVA 83
            KEQDVL +++RQG F+ L +  RFLDTLYFSGFCQDS D+R V+TVHANCCR+ISAK+A
Sbjct: 264 QKEQDVLDSMMRQGVFRNLGLRVRFLDTLYFSGFCQDSGDIRAVTTVHANCCRTISAKIA 323

Query: 82  DLMTVIHDWKRFL-SLSANETS 20
           DL  V+  WK F  S  ANET+
Sbjct: 324 DLTAVLRQWKSFKNSPPANETT 345


>ref|XP_002339511.1| predicted protein [Populus trichocarpa] gi|222832587|gb|EEE71064.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/143 (64%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
 Frame = -3

Query: 439 PFPHLMLNHSIDFQISTDKFF-NQWSQDRLINTGFYMINSNNKTIALFESWYAQKDNSKG 263
           PFP L  N +ID QISTD+F  +QWSQ   INTGF+MI SN  TI LF+ WY +KD S G
Sbjct: 121 PFPRLSFNKNIDLQISTDRFNGDQWSQTNPINTGFFMIRSNKNTIQLFDLWYERKDKSTG 180

Query: 262 LKEQDVLLNLLRQGAFQKLNITTRFLDTLYFSGFCQDSRDVRVVSTVHANCCRSISAKVA 83
            KEQDVL  +L  G F+KL +  RFLDTLYFSGFCQDS+D+R V+TVHANCCR+ISAK+ 
Sbjct: 181 QKEQDVLNGMLHGGVFKKLGLRVRFLDTLYFSGFCQDSKDIRAVTTVHANCCRTISAKIT 240

Query: 82  DLMTVIHDWKRFLSLSANETSTF 14
           DL  VI DWKRF   + NETSTF
Sbjct: 241 DLSAVIDDWKRFKRSAVNETSTF 263


>ref|XP_003520411.1| PREDICTED: uncharacterized protein At1g28695-like [Glycine max]
          Length = 353

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/147 (60%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = -3

Query: 439 PFPHLMLNHSIDFQISTDKFF-NQWSQDRLINTGFYMINSNNKTIALFESWYAQKDNSKG 263
           PF  L  N + DFQISTD +  N WS+   INTGFY + SNNKTI+LFE+WY QKDN+ G
Sbjct: 191 PFIRLSKNETEDFQISTDSYLGNPWSEKHPINTGFYFVRSNNKTISLFETWYGQKDNATG 250

Query: 262 LKEQDVLLNLLRQGAFQKLNITTRFLDTLYFSGFCQDSRDVRVVSTVHANCCRSISAKVA 83
            KEQDVLL+L+R G  + L +  RFLDTLYFSGFCQDS+D R V T+HANCCRSI+AKVA
Sbjct: 251 KKEQDVLLDLIRSGIVEHLGLRVRFLDTLYFSGFCQDSKDFRAVVTIHANCCRSITAKVA 310

Query: 82  DLMTVIHDWKRFLSLSANETSTFQWSR 2
           D+   + DWK+F  L AN T   QW++
Sbjct: 311 DMKVALRDWKKFKKLEANSTVNPQWTK 337


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