BLASTX nr result

ID: Bupleurum21_contig00035182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035182
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...   145   4e-33
gb|ACB45081.1| putative polyprotein [Solanum habrochaites]            142   3e-32
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            142   4e-32
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   134   8e-30
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]   132   3e-29

>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score =  145 bits (365), Expect = 4e-33
 Identities = 77/166 (46%), Positives = 110/166 (66%), Gaps = 11/166 (6%)
 Frame = +3

Query: 3    ENSNDSSI-NLRRSTRVSKPPVWLQNYN----TSFPQAKAIAQ--TASHLVQSQFSC--- 152
            E SN+  + +LRRSTR    P +LQ+Y+    +S P   AI +   +S L  S+ S    
Sbjct: 1204 EPSNEQPLPHLRRSTRAKNTPTYLQDYHRDLASSTPNTSAIVRYPLSSVLSYSRLSPAHR 1263

Query: 153  -FQASLSVSADPLHFSQAVQHQHWVTAMNT*LEALERNGTWKIVPLPANKNAIGCKWLYK 329
             F  S+S++A+P  +++A +H  W+ AM   L+AL+ N TW++ PLP +K AIGC+W+YK
Sbjct: 1264 NFVMSISLTAEPTSYTEASRHDCWIKAMKVELQALQSNNTWRLTPLPPHKTAIGCRWIYK 1323

Query: 330  TKYKPDGSIERYKSRLVVLGCRQQYGIDYMDTFAPVAKMTTVRASL 467
             KY+ DGSIER+K+RLV  G  Q  G+DY+DTF+PVAK+TTVR  L
Sbjct: 1324 IKYRTDGSIERHKARLVAKGYTQMEGLDYLDTFSPVAKLTTVRLLL 1369


>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
          Length = 559

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/156 (43%), Positives = 100/156 (64%), Gaps = 7/156 (4%)
 Frame = +3

Query: 21  SINLRRSTRVSKPPVWLQNYNTSFP---QAKAIAQTASHL----VQSQFSCFQASLSVSA 179
           S N R+STR S+PP+W +++ T+F    ++  +    +++    +   + C  A+LSV  
Sbjct: 272 SSNRRQSTRTSRPPIWQKDFVTTFKSRSRSNCLYSLENNIDYKNLSPYYQCCIANLSVDT 331

Query: 180 DPLHFSQAVQHQHWVTAMNT*LEALERNGTWKIVPLPANKNAIGCKWLYKTKYKPDGSIE 359
           +P  + QA + + W+ AM   ++ALE N TW++V LP  K AIGCKW+YK KYK +G +E
Sbjct: 332 EPKFYHQAAKDKRWIAAMKEEIQALEENKTWEVVTLPIGKKAIGCKWVYKIKYKANGEVE 391

Query: 360 RYKSRLVVLGCRQQYGIDYMDTFAPVAKMTTVRASL 467
           R+K+RLV  G  QQ G+DY DTF+PV KM TVR  L
Sbjct: 392 RFKARLVAKGYSQQEGLDYQDTFSPVVKMVTVRTVL 427


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  142 bits (357), Expect = 4e-32
 Identities = 76/161 (47%), Positives = 100/161 (62%), Gaps = 11/161 (6%)
 Frame = +3

Query: 18   SSINLRRSTRVSKPPVWLQNY---NTSFPQAKAIAQTA----SHLVQSQFSC--FQASLS 170
            ++ +LRRSTR SKPP WL ++    T  P +     TA    S++  S  S   FQ+  +
Sbjct: 610  TTTDLRRSTRSSKPPGWLHDFVHIATHSPTSSLTCSTAHPLSSYMSYSSISTPYFQSLCN 669

Query: 171  VSA--DPLHFSQAVQHQHWVTAMNT*LEALERNGTWKIVPLPANKNAIGCKWLYKTKYKP 344
             SA  +P  +++AVQH HW+ AM   L+AL  N TW +VPLP  K AIGCKW+YK K+  
Sbjct: 670  FSAIPEPTSYNEAVQHSHWIQAMELELKALHDNHTWDLVPLPLGKKAIGCKWVYKVKFNA 729

Query: 345  DGSIERYKSRLVVLGCRQQYGIDYMDTFAPVAKMTTVRASL 467
             G +ERYK+RLV  G  QQ G+DY +TF+PV KM TVR  L
Sbjct: 730  QGEVERYKARLVAKGYTQQEGLDYQETFSPVVKMVTVRVVL 770


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  134 bits (337), Expect = 8e-30
 Identities = 73/172 (42%), Positives = 97/172 (56%), Gaps = 19/172 (11%)
 Frame = +3

Query: 9    SNDSSINLRRSTRVSKPPVWLQNYN--TSFPQAKAIAQTASHLVQS-------------- 140
            S  S    RRS+R +K P  LQ+++   + P       + S +  S              
Sbjct: 892  SQPSPSQPRRSSRPTKTPTTLQDFHIEAALPSRPVPPSSTSEVAHSGTIHSLSQVLSYDR 951

Query: 141  ---QFSCFQASLSVSADPLHFSQAVQHQHWVTAMNT*LEALERNGTWKIVPLPANKNAIG 311
                   F   ++++ +P  FSQAV    W  AMNT ++AL+ N TW +VPLP++K  IG
Sbjct: 952  LSPMHKAFTVKITLAKEPRSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHKKPIG 1011

Query: 312  CKWLYKTKYKPDGSIERYKSRLVVLGCRQQYGIDYMDTFAPVAKMTTVRASL 467
            CKW+YK KY PDG+IERYK+RLV  G  Q  GIDY +TFAPVAK+TTVR  L
Sbjct: 1012 CKWVYKIKYNPDGTIERYKARLVAKGFSQVEGIDYRETFAPVAKLTTVRVLL 1063


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score =  132 bits (332), Expect = 3e-29
 Identities = 70/155 (45%), Positives = 97/155 (62%), Gaps = 11/155 (7%)
 Frame = +3

Query: 36   RSTRVSKPPVWLQNYNTSFPQAKAIAQT--ASHLVQS---------QFSCFQASLSVSAD 182
            R TRVSK P +L++Y+ S   + A  +T   SH +Q           +  F  S+S+ ++
Sbjct: 690  RXTRVSKQPSYLKDYHCSLINSVAHVETHSTSHPIQHFLSYDKLSPSYKLFSLSVSIISE 749

Query: 183  PLHFSQAVQHQHWVTAMNT*LEALERNGTWKIVPLPANKNAIGCKWLYKTKYKPDGSIER 362
            P  F++A +   W  AM+  LEALE N TW IV L   K+ +GCKW+YK K+K DG+IER
Sbjct: 750  PSSFAKAAEIPEWRAAMDCELEALEENKTWSIVSLXVGKHPVGCKWVYKIKHKADGTIER 809

Query: 363  YKSRLVVLGCRQQYGIDYMDTFAPVAKMTTVRASL 467
            YK+RLV  G  Q+ GIDY+DTF+PVAK+ TV+  L
Sbjct: 810  YKARLVAKGYTQREGIDYVDTFSPVAKLVTVKLLL 844


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