BLASTX nr result

ID: Bupleurum21_contig00035175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035175
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002514566.1| conserved hypothetical protein [Ricinus comm...    78   9e-13
gb|ABK94855.1| unknown [Populus trichocarpa]                           73   3e-11
ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    70   2e-10
ref|XP_002312366.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|222863950|gb|EEF01081.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
 Frame = +1

Query: 1   GPGGVSSGGRLNLFSEGLSQENETNVIEGSRDDSMSIERGTNQESP-NGGRKTESFIRSR 177
           GPG V  G  +   S G +Q+N  N  E S+D SMS++    + SP     K ES  RSR
Sbjct: 200 GPGEVFVGSGMKSVSGGQAQKNVMNAGEASKDVSMSVDHMATEGSPLKNETKRESLARSR 259

Query: 178 NKANEGQFDPGYESIQAEFNRGSDQAEPSEGTCQCQGTSSKGNALKKRKKIILDNELDQV 357
           ++A +G    G +S +AEF+ GS Q EPS     C   S+K    KKRK+   D ELDQ 
Sbjct: 260 DEAKKGVGGSGNDSDEAEFSGGSGQDEPSLLEGNCGELSAKSLGSKKRKRSGEDAELDQ- 318

Query: 358 HIAADPTEASKHHSENQKKGNQ 423
             A    +++K   E Q+KG+Q
Sbjct: 319 --AKGTPQSAKGSPETQQKGDQ 338


>ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
           gi|223546170|gb|EEF47672.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 566

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 54/141 (38%), Positives = 72/141 (51%)
 Frame = +1

Query: 1   GPGGVSSGGRLNLFSEGLSQENETNVIEGSRDDSMSIERGTNQESPNGGRKTESFIRSRN 180
           GP  V +   L   + G  Q N T V E S+D SMSIE    +      RK++S +RS +
Sbjct: 200 GPQEVFAASGLKTVTGGQGQNNVTIVGETSKDASMSIEHVAIEGPLKNERKSDSLVRSND 259

Query: 181 KANEGQFDPGYESIQAEFNRGSDQAEPSEGTCQCQGTSSKGNALKKRKKIILDNELDQVH 360
           +A +G    G ES +AEF+ G  Q E S         S+K   LKKRK+   D ELDQ  
Sbjct: 260 EAKQGAGGSGDESEEAEFSGGGGQEEASTLEGNGMELSAKSLGLKKRKRNGQDIELDQAK 319

Query: 361 IAADPTEASKHHSENQKKGNQ 423
                 EA+K + E Q+KG+Q
Sbjct: 320 GNLQSVEAAKDNVEAQQKGDQ 340


>gb|ABK94855.1| unknown [Populus trichocarpa]
          Length = 348

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
 Frame = +1

Query: 73  NVIEGSRDDSMSIERGTNQESP-NGGRKTESFIRSRNKANEGQFDPGYESIQAEFNRGSD 249
           N +E S+D SMS+     + SP     K+ES  RSR++A +G    G +S +AEF+ G  
Sbjct: 2   NAVEASKDVSMSVNHMATEGSPLKNETKSESLARSRDEAKQGMGGSGNDSDEAEFSGGGG 61

Query: 250 QAEPSEGTCQCQGTSSKGNALKKRKKIILDNELDQVHIAADPTEASKHHSENQKKGNQ 423
           Q EPS     C+  S+K     KRK+   D ELDQ        E +K   E Q+KG+Q
Sbjct: 62  QDEPSMLEGNCRELSAKSLGSNKRKRNGQDAELDQAKGTPQSAEPAKGSPETQQKGDQ 119


>ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
           [Vitis vinifera]
          Length = 609

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 56/132 (42%), Positives = 77/132 (58%), Gaps = 6/132 (4%)
 Frame = +1

Query: 49  GLSQENETNVIEGSRDDSMSIERGTNQESP-NGGRKTESFIRSRNKANEGQFDPGYESIQ 225
           G SQ++E ++ E S+D S ++ RG  + SP    RK+ES ++S  +A +G    G ES +
Sbjct: 248 GQSQKDEPSMAEISKDVSSAV-RGAMEGSPLKNERKSESLVKSLEEAKQGIGVSGNESDE 306

Query: 226 AEFNRGSD--QAEPS--EGTCQCQGTSSKGNALKKRKKIILDNELDQVH-IAADPTEASK 390
           AEF+ G    Q EPS  EGT   + +S KG   KKRK+   D E+DQV      P EASK
Sbjct: 307 AEFSGGGGGGQEEPSILEGTGG-EPSSGKGLGSKKRKRSGQDPEIDQVKGSPQQPGEASK 365

Query: 391 HHSENQKKGNQN 426
            + E Q KG+QN
Sbjct: 366 DNPEIQHKGDQN 377


>ref|XP_002312366.1| predicted protein [Populus trichocarpa] gi|222852186|gb|EEE89733.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   GPGGVSSGGRLNLFSEGLSQENETNVIEGSRDDSMSIERGTNQESP-NGGRKTESFIRSR 177
           GPG V  G  +   S G + +N  N +E S+D SMS+     + SP     K+ES  RSR
Sbjct: 202 GPGEVFMGSGMKSVSGGRAPKNVMNAVEASKDVSMSVNHMATEGSPLKNETKSESLARSR 261

Query: 178 NKANEGQFDPGYESIQAEFNRGSDQAEPS--EGTCQCQGTSSKGNALKKR 321
           ++A +G    G +S +AEF+ G  Q EPS  EG C+     S G+  +KR
Sbjct: 262 DEAKQGMGGSGNDSDEAEFSGGGGQDEPSMLEGNCRELSAKSLGSNKRKR 311


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