BLASTX nr result
ID: Bupleurum21_contig00035153
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00035153 (253 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI34155.3| unnamed protein product [Vitis vinifera] 130 8e-29 ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267... 130 8e-29 ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|2... 130 8e-29 ref|XP_002882372.1| hypothetical protein ARALYDRAFT_477743 [Arab... 130 1e-28 ref|NP_187125.1| RNA polymerase II transcription mediator [Arabi... 130 1e-28 >emb|CBI34155.3| unnamed protein product [Vitis vinifera] Length = 1724 Score = 130 bits (328), Expect = 8e-29 Identities = 71/84 (84%), Positives = 71/84 (84%), Gaps = 1/84 (1%) Frame = -3 Query: 251 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRF-XXXXXXXXXXPAIAQEELTQSE 75 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRF A AQEELTQSE Sbjct: 1444 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQPQQQPNSATAQEELTQSE 1503 Query: 74 IGEICDYFSRRVASEPYDASRVAS 3 IGEICDYFSRRVASEPYDASRVAS Sbjct: 1504 IGEICDYFSRRVASEPYDASRVAS 1527 >ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera] Length = 1758 Score = 130 bits (328), Expect = 8e-29 Identities = 71/84 (84%), Positives = 71/84 (84%), Gaps = 1/84 (1%) Frame = -3 Query: 251 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRF-XXXXXXXXXXPAIAQEELTQSE 75 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRF A AQEELTQSE Sbjct: 1478 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQPQQQPNSATAQEELTQSE 1537 Query: 74 IGEICDYFSRRVASEPYDASRVAS 3 IGEICDYFSRRVASEPYDASRVAS Sbjct: 1538 IGEICDYFSRRVASEPYDASRVAS 1561 >ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|222858017|gb|EEE95564.1| predicted protein [Populus trichocarpa] Length = 1740 Score = 130 bits (328), Expect = 8e-29 Identities = 71/84 (84%), Positives = 71/84 (84%), Gaps = 1/84 (1%) Frame = -3 Query: 251 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRF-XXXXXXXXXXPAIAQEELTQSE 75 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRF A AQEELTQSE Sbjct: 1464 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQQQNNAAAQEELTQSE 1523 Query: 74 IGEICDYFSRRVASEPYDASRVAS 3 IGEICDYFSRRVASEPYDASRVAS Sbjct: 1524 IGEICDYFSRRVASEPYDASRVAS 1547 >ref|XP_002882372.1| hypothetical protein ARALYDRAFT_477743 [Arabidopsis lyrata subsp. lyrata] gi|297328212|gb|EFH58631.1| hypothetical protein ARALYDRAFT_477743 [Arabidopsis lyrata subsp. lyrata] Length = 1702 Score = 130 bits (326), Expect = 1e-28 Identities = 70/83 (84%), Positives = 71/83 (85%) Frame = -3 Query: 251 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFXXXXXXXXXXPAIAQEELTQSEI 72 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSV+RF A AQEELTQSEI Sbjct: 1425 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVRRF-HHQQQQNGSSAAAQEELTQSEI 1483 Query: 71 GEICDYFSRRVASEPYDASRVAS 3 GEICDYFSRRVASEPYDASRVAS Sbjct: 1484 GEICDYFSRRVASEPYDASRVAS 1506 >ref|NP_187125.1| RNA polymerase II transcription mediator [Arabidopsis thaliana] gi|75207288|sp|Q9SR02.1|MED14_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 14; AltName: Full=Protein STRUWWELPETER; Short=AtSWP gi|6175174|gb|AAF04900.1|AC011437_15 hypothetical protein [Arabidopsis thaliana] gi|20068999|gb|AAM09647.1|AF466359_1 SWP1 [Arabidopsis thaliana] gi|23898273|emb|CAD53582.1| struwwelpeter 1 protein [Arabidopsis thaliana] gi|332640609|gb|AEE74130.1| RNA polymerase II transcription mediator [Arabidopsis thaliana] Length = 1703 Score = 130 bits (326), Expect = 1e-28 Identities = 70/83 (84%), Positives = 71/83 (85%) Frame = -3 Query: 251 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFXXXXXXXXXXPAIAQEELTQSEI 72 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSV+RF A AQEELTQSEI Sbjct: 1424 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVRRF-HHQAQQNGSSAAAQEELTQSEI 1482 Query: 71 GEICDYFSRRVASEPYDASRVAS 3 GEICDYFSRRVASEPYDASRVAS Sbjct: 1483 GEICDYFSRRVASEPYDASRVAS 1505