BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035151
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...   251   6e-65
ref|XP_002530010.1| pentatricopeptide repeat-containing protein,...   243   1e-62
ref|NP_197038.1| pentatricopeptide repeat-containing protein [Ar...   233   1e-59
ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-59
ref|XP_002873720.1| pentatricopeptide repeat-containing protein ...   230   1e-58

>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  251 bits (640), Expect = 6e-65
 Identities = 116/178 (65%), Positives = 148/178 (83%)
 Frame = +1

Query: 1   AFQSLVEMLCDTGVGLNYVMLCSLLGACTQSGDLMMGKWIHVYAIKKTESEIDIMVATSL 180
           +F  + EM+ D  + LNYV LCS+L AC+QSGDLMMG+W+H YA+K  E E++IMV T++
Sbjct: 234 SFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAM 293

Query: 181 IDMYAKCGQIDTAYQVFKTMARKNVVVWNAMLSGLAMHGRGQVALDMFPQMLQEVKPDDI 360
           +DMYAKCG+I  A++ FK M ++NVV WNAMLSGLAMHG G+ ALD+FPQM +E KPDD+
Sbjct: 294 VDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEAKPDDV 353

Query: 361 TFTALLSACSHSGLVDQGRKCFSNIKSVYGISPSMEHYSCMVDLLGRAGKLEEAEGLI 534
           TFT++LSACSHSGLVDQG   F N++SVYGI+P +EHY+CMVDLLGRAG+LEEAE L+
Sbjct: 354 TFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILV 411


>ref|XP_002530010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530489|gb|EEF32372.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  243 bits (620), Expect = 1e-62
 Identities = 114/177 (64%), Positives = 145/177 (81%)
 Frame = +1

Query: 4   FQSLVEMLCDTGVGLNYVMLCSLLGACTQSGDLMMGKWIHVYAIKKTESEIDIMVATSLI 183
           F  L EM+    + LNYV LCS+L AC QSGD++MG+W+HVYA+KK   EID+MV T+LI
Sbjct: 247 FLLLSEMVLGLRLELNYVTLCSILSACAQSGDVVMGRWVHVYALKKMGREIDMMVGTALI 306

Query: 184 DMYAKCGQIDTAYQVFKTMARKNVVVWNAMLSGLAMHGRGQVALDMFPQMLQEVKPDDIT 363
           DMYAKCG+I  AY+VFK + R+NVV WNA+L GLAMHG+G++ L +FP+M+QE KPDD+T
Sbjct: 307 DMYAKCGRIKMAYEVFKYLPRRNVVAWNAILGGLAMHGKGRIVLVIFPKMIQETKPDDLT 366

Query: 364 FTALLSACSHSGLVDQGRKCFSNIKSVYGISPSMEHYSCMVDLLGRAGKLEEAEGLI 534
           F A+LSACSHSGLVDQG + F  ++S YGI+P +EHY+C+VDLLGRAG+LEEAE LI
Sbjct: 367 FIAVLSACSHSGLVDQGCQYFHILESEYGITPKIEHYACVVDLLGRAGRLEEAEMLI 423



 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 33/204 (16%)
 Frame = +1

Query: 10  SLVEMLCDTGVGLNYVMLCSLLGACTQSGDLMMGKWIHVYAIKKTESEIDIMVATSLIDM 189
           SL E +   GV L+ V    +   C + G+L MG+  H   +K     I++ V  +++++
Sbjct: 116 SLFEEMRKRGVILDDVAFVCVFSLCARVGNLEMGRQAHGCVVKMGFG-INVKVCNAVMNV 174

Query: 190 YAKCGQIDTAYQVFKTMARKNVVVWNAMLSGLAMH---GRGQVALDMFPQ---------- 330
           Y KC  +  A  VF  M  +++V W A+L G+        G+V  D  P+          
Sbjct: 175 YVKCRLMGEAKGVFSEMGERDIVSWTALLEGVVNWEGVENGKVVFDQMPERNEVGWTIMI 234

Query: 331 --------------MLQE------VKPDDITFTALLSACSHSGLVDQGRKCFSNIKSVYG 450
                         +L E      ++ + +T  ++LSAC+ SG V  GR          G
Sbjct: 235 SGYVGSGFCKEGFLLLSEMVLGLRLELNYVTLCSILSACAQSGDVVMGRWVHVYALKKMG 294

Query: 451 ISPSMEHYSCMVDLLGRAGKLEEA 522
               M   + ++D+  + G+++ A
Sbjct: 295 REIDMMVGTALIDMYAKCGRIKMA 318


>ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15340, mitochondrial; Flags: Precursor
           gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis
           thaliana] gi|332004768|gb|AED92151.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  233 bits (594), Expect = 1e-59
 Identities = 107/180 (59%), Positives = 145/180 (80%), Gaps = 6/180 (3%)
 Frame = +1

Query: 13  LVEMLCDTGVGLNYVMLCSLLGACTQSGDLMMGKWIHVYAIKKT------ESEIDIMVAT 174
           L EM+   G GLN+V LCS+L AC QSG+L++G+W+HVYA+KK        S  D+MV T
Sbjct: 231 LAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGT 290

Query: 175 SLIDMYAKCGQIDTAYQVFKTMARKNVVVWNAMLSGLAMHGRGQVALDMFPQMLQEVKPD 354
           +L+DMYAKCG ID++  VF+ M ++NVV WNA+ SGLAMHG+G++ +DMFPQM++EVKPD
Sbjct: 291 ALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPD 350

Query: 355 DITFTALLSACSHSGLVDQGRKCFSNIKSVYGISPSMEHYSCMVDLLGRAGKLEEAEGLI 534
           D+TFTA+LSACSHSG+VD+G +CF +++  YG+ P ++HY+CMVDLLGRAG +EEAE L+
Sbjct: 351 DLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILM 409


>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  233 bits (593), Expect = 2e-59
 Identities = 109/177 (61%), Positives = 140/177 (79%)
 Frame = +1

Query: 4   FQSLVEMLCDTGVGLNYVMLCSLLGACTQSGDLMMGKWIHVYAIKKTESEIDIMVATSLI 183
           F  L EM+    +GLN+V L S+L AC QSGD++MG+W+HVYA+K    E+ IMV T+L+
Sbjct: 239 FLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALV 298

Query: 184 DMYAKCGQIDTAYQVFKTMARKNVVVWNAMLSGLAMHGRGQVALDMFPQMLQEVKPDDIT 363
           DMYAKCG ID A++VFK + ++NVV WNAML GLAMHGRG+  LD+FP+M++E KPDD+T
Sbjct: 299 DMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIEEAKPDDLT 358

Query: 364 FTALLSACSHSGLVDQGRKCFSNIKSVYGISPSMEHYSCMVDLLGRAGKLEEAEGLI 534
           F A+LSACSHSGLVDQG   F +++S YG +P +EHY+CMVD+LGRAG LEEA  LI
Sbjct: 359 FMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGHLEEAVMLI 415


>ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319557|gb|EFH49979.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 623

 Score =  230 bits (586), Expect = 1e-58
 Identities = 104/180 (57%), Positives = 146/180 (81%), Gaps = 6/180 (3%)
 Frame = +1

Query: 13  LVEMLCDTGVGLNYVMLCSLLGACTQSGDLMMGKWIHVYAIKKT------ESEIDIMVAT 174
           L EM+   G GLN+V LCS+L AC QSG+L++G+W+HVYA+KK       E+   +MV T
Sbjct: 231 LAEMVFRCGHGLNFVTLCSMLSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGT 290

Query: 175 SLIDMYAKCGQIDTAYQVFKTMARKNVVVWNAMLSGLAMHGRGQVALDMFPQMLQEVKPD 354
           +L+DMYAKCG ID++ +VF+ M ++NVV WNA+ SGLAMHG+G++ +DMFP+M++EVKPD
Sbjct: 291 ALVDMYAKCGNIDSSIKVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPEMVREVKPD 350

Query: 355 DITFTALLSACSHSGLVDQGRKCFSNIKSVYGISPSMEHYSCMVDLLGRAGKLEEAEGLI 534
           D+TFTALLSACSH G+VD+G +CF +++  YG+ P ++HY+CMVD+LGRAG++EEAE L+
Sbjct: 351 DLTFTALLSACSHLGMVDEGWRCFHSLQ-FYGLEPKVDHYACMVDILGRAGRIEEAEILM 409